AMCG00019278


Basic Information

Item Value
gene id AMCG00019278
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 12052660 ~ 12053218 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019278
GATAATGGGGCCTGTGTGTCCTCTCCAGGCCTGCAGGAGGAAGGCCTGTTCAGAGTCAGTGGGTCTGTGGTGAGAGCGAAGATGCAGAAGGCCAGGTTCGACTGTGGAGAGACAGTGGACCTGGAGACGGAGGGGTACGTCCCCATCGTGACTTCAGTGCTGAAGCTGTTCCTCAGGGTTCTCCCCAAGGCTCTGATTCTGGACCACCCAGACATTGTCTTCAAAGGAAGTAAAGACAAAGCTGAGCTGAGCAGCTGCCTACAGACTGAGCTGGACAGTCTGCTGGCAGAGCATGTGCGTCTCATCCACTTCCTGGTCCGAGTGGCATCTTATAGCGACACCAATAAGATGACAGAACAGAACTTGGGGACAGTGTTCGGATTCTGCATATTCCAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019278 True 399 mRNA 0.54 2 12052660 12053218

Neighbor

gene id symbol gene type direction distance location
AMCG00019277 apcdd1,LOC107383547,LOC100712112 coding downstream 98201 11936104 ~ 11954459 (-)
AMCG00019266 LOC106596660,LOC106569828,LOC100697261 coding downstream 278343 11758115 ~ 11774317 (-)
AMCG00019256 NA coding downstream 724301 11283571 ~ 11328359 (-)
AMCG00019258 NA coding downstream 856869 11177703 ~ 11195791 (-)
AMCG00019257 NA coding downstream 926943 11120227 ~ 11125717 (-)
AMCG00019279 piezo2 coding upstream 25344 12078562 ~ 12138607 (-)
AMCG00019288 NA coding upstream 389470 12442688 ~ 12445186 (-)
AMCG00019286 usp14,LOC106569325 coding upstream 401861 12455079 ~ 12463992 (-)
AMCG00019287 rock1,LOC106569322 coding upstream 412908 12466126 ~ 12504550 (-)
AMCG00019291 NA coding upstream 547315 12600533 ~ 12613847 (-)
G32779 NA non-coding downstream 51495 12000950 ~ 12001165 (-)
G32773 NA non-coding downstream 73387 11930504 ~ 11979273 (-)
G32706 NA non-coding downstream 416343 11633509 ~ 11636317 (-)
G32693 NA non-coding downstream 451989 11596816 ~ 11600671 (-)
G32635 NA non-coding downstream 933153 11118708 ~ 11119507 (-)
G32784 NA non-coding upstream 6406 12059624 ~ 12060251 (-)
G32786 NA non-coding upstream 9060 12062278 ~ 12067052 (-)
G32825 NA non-coding upstream 313568 12366786 ~ 12367226 (-)
G32844 NA non-coding upstream 399379 12452597 ~ 12453627 (-)
G33030 NA non-coding upstream 1050735 13103953 ~ 13106250 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other downstream 167089 11852108 ~ 11885571 (-)
AMCG00019213 NA other downstream 2618546 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 3150782 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 5368359 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 7066276 4941059 ~ 4986384 (-)
AMCG00019284 NA other upstream 359936 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 1115218 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 1608898 13662116 ~ 13665230 (-)
G33163 NA other upstream 2438673 14491891 ~ 14558290 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other upstream 2898624 14951842 ~ 14991996 (-)

Expression


Co-expression Network