AMCG00019279 (piezo2)


Basic Information

Item Value
gene id AMCG00019279
gene name piezo2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 12078562 ~ 12138607 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019279
tTATTTTGGCATTTCACCTGCAATTCAAACCAACTGCTCCTACACGTGGAAGATGGTATATAATTACAATCTGGAGTGGTACCACTATGTCAACCCCATCATGATTTTGGTGCTGTACTACACCCTCGCCACCCTCATTCGACTCTGGCTTCAAGACCCAATTGAAGATATGTATGAAGACGAggatgaagaagaagagaatGAGATAGAGGAAGATGATAAAGAGCCTCTTCTTTCAACCCAGGATGGATACAGCACATCTGATGTGCTCTTGGTCACAGCGAATGGAACACCTATGGATTATCAAAGTATATCCTCCGCCCTGGCCATTGAGAACGGTCCTCCCAAGCTAGATATGTATTCCACACCTCAGTACAAAGTTGACCAAGCAGATGACGAGTCAGagaaaaaagaagATAGTGAGATTTGTGAAGATTTTCAGGATATTTCGGAAGAGGATGAGAATCCCAAAGTGAATGCCATGGTGACCATTTTCAGATTTATCATGAAGCAAAGCTACATCTGTGCTTTAATAGCTATGATGGCTTGGAGTATCACCTATGTCAGTTGGCTTACCTTTGTTTTTCTGATCTGGTCCTGCACCCTCTGGATGGTCCGCAACAGACGGAAATACGCCATGCTCACATCTCCGTTCATGGTGTTCTATGGAAACCTGTTATTGATTCTGCAGTATATCTGGAGCATTGAAGGTGTGGGGGAAGTTCGAGATGTTTTTCTAAAGTCAGAAGTACCTTTTCAGAACCTGGGATCAAAgGGGGAGGAAGATGAAGAAAATGGTGGTGACAAAGACATCATGCAGGTTCTGGGCAACATGGTGATGGGAATGTTCGTGAAATACTGGATCTACATCTGTGGAGGGATGTTCTTTTTTGTCAGCTTTGAGGGGGACATAGTACTGTACAAAATCATCTACATGatgctctttcttttctgtgtcGCTCTGTATCAGGTGCATTATGATTGGTGGAggagaattttaaaatatttctggaTGTCAGTGGTGGTTTATACCATGTTGGTCCTTATCCTCGTATACACCTTTCAGTTTAAGTCATCTGATAGTGTATGGACAGATATGACTGGATGGGACACAGAGAAGCTGAAGGATCTGGGCCTGGAAAAATTCACATTGCCAAAACTTTTCGGCCGGATCTTTATCCCGTCCTCTTTCCTGCTTGTGTGTATTCTGCACCTGCACTATTTTCACGATCACTTCCTCCAGCTTACTGACCTGAAGGCTGTGGCTGCCAAGCAGAACAGTACTATTTACAGACTGGTGCACCAAGATGGGAGCTTGGCAGACATAACAATGATAAACTCCTCCTGTGGCACAATAAagaagggagaggaagagaaagtgTCTcaggaggcaggagaggagagttACAAGGAAAAGGAGCCACTAGATAAAGGCAGTAAAGCAGAGAGCAGACACTGCAGTGTAGGAACAGAGACAACAACCACAGAGGATACCTCAGATCTCAAGAATAAATGGCACTTGGTGCTAGATCGTCTGACAGTCCTTTTCCTGAAGTTTCTGGAATACTTTCACAAACTACAGTTATTCATCTGGTGGTTGTTAGAGTTGCATATCATCAAAATTGTCTCAACATACATCATCTGGCTCACCATCAAAGAGGTTTCCCTATTTAATTATGTCTTCTTAATAAGCTGGGCTTTTGCTCTTCCATATAGTCGGTTTCGTCCTTTAGCTTCAAGTGTCTGTACTGTCTGGACCTGTGTGATAATTGTCTGCAAAATGTTGTACCAGCTGAAATCGATTCAACCTCAAAACTACTCTAGAAATTGTTCAGTGCCAAAtctgaaagaaaaccaaaaaaactcaGTTCTTTACTCTAGTCCTCTTGATCCGGCAAACTGGGTTGGACTAACAAAACTGTCTCCTCTCCTGGAAAACCTTAGGAACAACCTGTTGATGCTGGCAATTTTGGCCTTAGAAGTGACAATTTATCGTCATCAGGAATACTATAGATTAAGAAACAATCTTACAGCTCCTGTCACTAGAACCATCTTTCATGATATCACAAGACAACATCTGGATGATGGAATTGTGAACTGTGCTAAGTATTTCATAAACTACTTCTTCTACAAGTTTGGTTTGGAGACATGCTTCCTCTTGGCCGTCAATGTTATCGGCCAGAGAATGGACTTCTATGCAATGCTCCATGCCTTCGGTTTAATTGCCGTCATGTATCGGCGCAGAAGAAAAGCCATTGCAGAAGTCTGGCCAAAGTACTGCTGCTTTCTGGCCTGCATTATGACAGTTCAgtactttatttgtattggcATTCCACCAGCAGCTTGTCAAGATGACTTCATGTTACTGCTGTGTGCATCCTTACAAGGAGAAGTGTTTGAAGATGAGAACAAAGCTGCAGTGCGAATCATGGCTGGAGACAACGTGGAGATCTGCAGGGACCTGGATGCGGCCTCATTCAGCCAGCACAACCCTGTTCCTGACTTCATTCACTGCAGGTCTTACTTGGACATGCTGAAGGTGATCATTTTCAGCTATCTCTTTTGGTTTGTGCTCACCATCATCTTCATCACGGGCACAACTCGGATTAGCATATTCTGCATGGGATACTTGGTGGCCTGCTTCTATTTCCTTCTGTTTGGAGGTGATTTATTGCTGAAGCCAATTAAGAGCATTCTCCGCTTCTGGGACTTCCTCATTGCCTACAATGTGTTTGTGATAACCATGAAGAACATATTTTCTTTAGCAGCCTGTGGTTACATTGATGTATTGATTACCAAAAGCTGTTGGttaattcagttattcagtCTTGCGTGCACCATAAAAGATTATGATGATCCATTTAAAGATAGACCAGACGATAAAAAATACTGTGAATTGCCCAGTGATGAAGCAGGCATCATTTGGGACAGCATATGCTTTGCTTTTCTGTTGCTTCAGAGAAGGGTCTTCATGAGCTACTACTTCTTGCATGTGGTTGCAGATATAAAGTCTTCCCAAATCTTAGCTTCAAGAGGGGCTGAGCTCTTTCAGGCCACAATTGTCAAGGCTGTGAAGGCAAGaattgaagaagagaaaaaatctATGGATCAACTCAAGAGACAAATGGAACGTATTAAAACCCGGCAGCAGAAGTTTAAGAAGGGTAAGGAGAAGATGCTGAGTTTGGCACAGGAGTCTGCGGAGGGACAGAGCCAGATACAggaagaagaagatgatgaCAgagaAGCAGACAAGGAAAAGGCCAAGGGCAAAAAAAAGCAGTGGTGGCGGCCTTGGGTAGACCATGCTTCCATGGTGCGCAGTGGGGATTATTACTTGTTTGAGACTgacagtgaggaggaggaggaggaagataaAAATCCAGAAGAGCCACCCAAGAAATCAGCATTTCAGTTTGTGTACCACGCCTGGATTACAGACTCCAAAACTGCTATGAAGGAGCGCAACAAAGAAAAGCGAAGGTTTTGGAAGCGATATACAGATAAAGACAAAAAGGGAACAGGTGGAAAAGAAGGTCATGTTGCCATTGAATGTGGGGAAAGGGAGGATGAGCGAGAAAGTGTGGAAGAAGGAAAGACATCAGATGGGCCAGATAACATCATTAAGcgcatttttaatattgtgaagTTTACGTGGGTCCTTTTCCGTGCACTGCTGGACAGTTTTACGGCATGGCTGAACTCCATCTGCAGAGAGCACATTGATATATCCACTGTTCTCAGAATAGAACGGTGCATGCTGAccagagaaattaaaaagGGGAATGTTCCATCCCGAGAGAGTATACACATCTATTACCAGAAGCAGATGCACATGAATCTTTCCAGGGAGTCTGGCCTGGACAGGATTGATGAAGATCTCTCTGGTTCCAGCTCCCAGAAAGCAGAGCGGAAACGTGGTGCTCATAGGATGGACAGCTTAGATTCGGTTGCCTCCCGTGACACCTTGTCAAGCGTCTACACAGAGGCCACCATGCTGTTTTCACGGCAGTCCACCTTAGACGATTTAGATGGGCCAGAAAACGTTCCTAAAACGAGTGAGCGCGCTCGCCCTAAGCTGCGCAAAATGTACAGCATGGACATGTCCTCTTCATCCGCAGACAGTGGCAGCATTGTGTCAAGTGAGCCTACCCAGTGCACCATGCTGTACTCACGCCAGGGCACGACGGACACCATAGAAGAAGTGGAGGACGAACAGGACGAGGAAGCGGCCTCCTCCGGTGCAGTGGCAATCCCCACAACCTCAGACGGGGTTCAGGGGTCTGAGGGACGAGCATCTGAGGCACAAAAAGCAGTTCACAGTCCAAGGGATACCGTCTCTTATGGGGAGGGACAAGAACGTTGCACACAAGAGGAGGAATCAGAAAGGACAGGAGATGAACAGCACCCGGGCGAAGGTCAGGATTACCAAATGGGCGGCCGTGAGGCGGATGACGAAGTTCACTTATACCCAGCCGAATGTGACATCCAGCTGTACACCCCCGACACAGACGCGCCCACCACATACCCTACCGATGTGGACGTGGATGTTCCCCCTTCCTACAGCAAAGCGGTCAGCTTCGACAGGATGTCCGTGAGCTCTGACGAGGACGACAAAGGCCTGATGGCTATGACCCCCGATGACAGCAGATCTGACCGCATAGACGATACCTTGCTGCCTTCACTCACTCACGAGCTGACGGCCAGCGAACTCCTGCTCAACAAGATGTTTTACGATGAAGAGCTGGAATCCTCTGAAAGATTCTACAAATCGCAGCCTCAGATTTTGCAGCTCGTCTATGCTCTCTACAACATGCTGGTGGCCCATTCTGAAATGGTGTGCTACTTCGTCATCATCCTCAATAACATGATCTCAGCCTCCACTGTCACCCTGGTGCTTCCCATCCTCATCTTCCTGTGGGCGATGCTTTCTGTCCCCAGACCCAGCAAACGTTTCTGGATGGCAGCTATTGTCTACACTGAGgtAACAATtgtgatcaaatacttctttcaATTTGGATTTTTCCCCTTCAATCAGCAAATTTTAGAGCGGAATAAGCCCTATTTCCCACCCAATATCATTGGTATTgagaagaaggaaggctatgtGCACTATGACCTGGTCCAGCTCCTTGCCCTCTTTTTTCACAGGTCCATATTAAAGTGCCATGGTTTGTGGGATGAAGATGACTGTAGTGCCACGGAAAAGGCCACACACAGGGATGATTCGGAGGATGAATGCTCCATGGCCATAGAGAGAAGGGAGTCCGCTGGGTCCCTGAAGTCCATCAACCTGGCAGCCTCCCTGGAGTCTATTCATGTTCACTTCCCAGAGCAGCAGACCCCGGTGCGAAGGAAGAGCTCCAGCGCGGGGTCCCAGATCTCTCGCAGGTCCACCCGCTCCTCCTCCAGCACCAGTACCCACAACAGCAGCCGGAAGGGCAGCAGTGTCCTCAGCGTCCAGCAAAAGAGTCGAAAGGAGCTGGTGCTTGAAAAGCTGAGGGAGCAACTCATCAAAGCTAAGGCCTTCACAATTAAGAAAACCCTTGAAGTCTACATCCCTATTCGGCAGTTTTTCTACAATCTGATTCACCCAGAGTACAGCGCTGTGACCGATGTCTATGTGTTGATGTTTCTGGCAGACACAGTtgacttcattattattgtgtttggcTTCTGGGCATTTGGGAAACACTCTGCCGCAGCAGACATTACATCCTCCCTGTCAGAGGATCAGGTTCCAGAAGCTTTCCTGGTGATGGTTTTGATTCAGTTTGGAACCATGGTGGTTGATCGGGCCCTGTACCTCAGGAAGACCGTAATGGGAAAAGTCATTTTCCAAGTCATCTTGGTCTTTGGAATACACTTTTGGATGTTCTTCATCCTACCTGGTGTGACAGATAGGCGGTTCAGTCAGAACACTGTGGCTCAGCTGTGGTACTTCGtgaagtgcatttattttggaTTATCTGCCTATCAGATCAGATGCGGCTATCCAACACGTGTGCTTGGCAACTTTCTAACCAAAAGCTACAACTATGTCAACCTCTTTTTATTCCAAGGTTTCCGCCTCGTACCCTTCCTGACGGAGCTCAGGGCTGTGATGGACTGGGTGTGGACTGACACCACACTCAGCTTGTCCAGCTGGATCTGTGTGGAAGACATTTACGCCCACATATTTGTGCTTAAGTGTTGGAGAGAGTCAGAGAAGAGATATCCCCAGCCAAGGggacagaagaagaagaaagtggTGAAGTATGGAATGGGGGGTATGATTGTGATGTTGCTCATCTGCATCGTATGGTTTCCCCTGCTCTTCATGTCTCTGATCAAATCTGTGGCTGGTGTTGTTAACAGACCTTTAGACGTCTCCATAACAATAACACTCGGTGGCTTCCAGgcAGCACTGCAGGCTTTAGAAGCATTCGCATATGAGGATGTCACAATAGCAAACCTGGAAGGTGACTCTAGTTCCCTGTGGACTATCAGTCCTCCAAGTCGAAAAAAACTAATTGAGGACCTGAGGATTTCAAAAGAATTTCAGATTACTATTGCATGGAACATTCGAAGGAATGCTACTCTAGGTGCGAAAGACGAAGACGCACTGGATAAGCATACAGTACAACTTGATAATGCCACACAATCAGagcttattaatttattgaatggAACGCTAAAAAAGCCtgtgaaaatagaaaatgctATCCCGTGCTTTATCAAAGCACCCAGCAATTCCAACGCAAAACCTATAGAGGCTCTGTATGAAGACGGAAAGTACAGGAGCATCACACTGACACTTGAGAAAAAGGAAATTGACGCTATGGAGGTGGAGTGGTGGACTGTTAACATGAGCAGACCTGAGAGAGGAATACCTGCTGAAAACATGAACGGAATTGTTCTCTATGTCTTCAGTAATAAAGTCAGTCCTCCAAGCTTAGGTTTTCTCGCCGGATATGGAATCATGGGTTTGTATGCCTCTGTGGTGTTGGTGATCGGGAAGTTTGTGCGCGAGTTCTTCAGTGGAATCTCCCATTCGATCATGTTTGAGGAGCTTCCCAACGTGGACCGGATCCTCAAGCTGTGCACGGACATCTTCCTGGTGCGAGAGACCGGGGAGCTGGAGCTAGAGGAGGACCTGTATGCCAAGCTCATCTTCCTGTACAGATCTCCCGAGACGATGATCAAATGGACACGGGAGAAGACACACTGAGAGCTGCTTGAAACACTGACAATGTAAAAACCATAAGCACAATACTGTCAGAATAGGTATGCTTTCTGTGTAAGGAATGGGCAgtactatttttgttttccctggcAGGGCCAAGGAGCCTACACTTCTGAATTCCCACTGCCTGTACAACTTAACCCCGTAAGCAAAAGGAGattctgatgtttttaaaatgttattctgaAGAATCGAGGCAATCGTTCACCGGTCTTCTTAGAGATGGATCAATGTGCGGGCTTTTATTGTACGACTCCCTTACTCTCTCAGATTGGAATATATAAATCTTGGGTTGTGCAATACGCTGTCCTGACTGGCTGGCTGTAAACTTGAAGGGACATGAAACTTTTTGTGGTTTATTCCTGGAAACACAAGGGCAGTGACTGACTGAAAAACACTAgccacttttcttttaattttttaattttttaaacctGGAAAGGGTTTGGCTTTGCAagaaacagagagaaggagttttgagacagacacagaagacAAATTATATGACAATCTGTTATCTGCCTTATTATGTTTGTACAGTCAACTAAACAATGTGTAAACCATTAAGGATGTTTTtctcaggaaaataaataaatcatctcaCCTGGAGGGTACTATTCCCCACATCCACGATGAGCATTATTAAGAATAGATCATCTCTTCTTATGTTTGAGCCCAAGGAATCCAGTCTGTGCGTGATTTAGCCCTGGGTGCAGGGTATCTGTGCTTGGAGGAATTTCTTAACTTTAGTCCTATACTGtatgaatgcattcattttcttaatgtgtatttttatggaCATTTAAATTCTTAAACATAAaagacttttaattaaatttctaCATCCactaaaacaaagagaaagaaatgtttACATCATGacttgtcatttttttgttcttaaggTTAAGTAAAATTAGTCAATACAATAGGCTGGAGCTAAAGGTAGTCCAACTATGCATTAGAAAACCTTGTagcatgaaacaaaaacaaaaaacaaaaaaacaaaaatatgggtattaattttcattccatgtacatacatttttttgagaaaaaaaaaaaaaa

Function

symbol description
piezo2 Predicted to enable mechanosensitive cation channel activity. Predicted to be involved in several processes, including cellular response to mechanical stimulus; detection of mechanical stimulus involved in sensory perception; and regulation of membrane potential. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Implicated in distal arthrogryposis type 3 and distal arthrogryposis type 5.

NR:

description
PREDICTED: piezo-type mechanosensitive ion channel component 2

GO: NA

KEGG:

id description
K22128 PIEZO1_2, FAM38; piezo-type mechanosensitive ion channel component 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019279 True 8293 mRNA 0.45 43 12078562 12138607

Neighbor

gene id symbol gene type direction distance location
AMCG00019278 NA coding downstream 25344 12052660 ~ 12053218 (-)
AMCG00019277 apcdd1,LOC107383547,LOC100712112 coding downstream 124103 11936104 ~ 11954459 (-)
AMCG00019266 LOC106596660,LOC106569828,LOC100697261 coding downstream 304245 11758115 ~ 11774317 (-)
AMCG00019256 NA coding downstream 750203 11283571 ~ 11328359 (-)
AMCG00019258 NA coding downstream 882771 11177703 ~ 11195791 (-)
AMCG00019288 NA coding upstream 304081 12442688 ~ 12445186 (-)
AMCG00019286 usp14,LOC106569325 coding upstream 316472 12455079 ~ 12463992 (-)
AMCG00019287 rock1,LOC106569322 coding upstream 327519 12466126 ~ 12504550 (-)
AMCG00019291 NA coding upstream 461926 12600533 ~ 12613847 (-)
AMCG00019292 abhd3 coding upstream 477540 12616147 ~ 12635259 (-)
G32786 NA non-coding downstream 11510 12062278 ~ 12067052 (-)
G32784 NA non-coding downstream 18311 12059624 ~ 12060251 (-)
G32779 NA non-coding downstream 77397 12000950 ~ 12001165 (-)
G32773 NA non-coding downstream 99289 11930504 ~ 11979273 (-)
G32706 NA non-coding downstream 442245 11633509 ~ 11636317 (-)
G32825 NA non-coding upstream 228179 12366786 ~ 12367226 (-)
G32844 NA non-coding upstream 313990 12452597 ~ 12453627 (-)
G33030 NA non-coding upstream 965346 13103953 ~ 13106250 (-)
G33070 NA non-coding upstream 1116756 13255363 ~ 13257313 (-)
G33076 LOC104962440 non-coding upstream 1172896 13311503 ~ 13311800 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other downstream 192991 11852108 ~ 11885571 (-)
AMCG00019213 NA other downstream 2644448 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 3176684 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 5394261 6680625 ~ 6684301 (-)
AMCG00019128 gorasp1,LOC103377203 other downstream 7092178 4941059 ~ 4986384 (-)
AMCG00019284 NA other upstream 274547 12413154 ~ 12423320 (-)
AMCG00019312 NA other upstream 1029829 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 1523509 13662116 ~ 13665230 (-)
G33163 NA other upstream 2353284 14491891 ~ 14558290 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other upstream 2813235 14951842 ~ 14991996 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015957 LO018508.1 coding NC_007113.7 CM002886.2 54327160 ~ 54353625 (+)