AMCG00019281 (gnal,LOC107554377,LOC107732066,LOC107667176,LOC106520735)


Basic Information

Item Value
gene id AMCG00019281
gene name gnal,LOC107554377,LOC107732066,LOC107667176,LOC106520735
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 12324271 ~ 12325838 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019281
ATGGGTTGTTTAGGCAACAGCAAGACTGAAGATCAACGCATCGACGAAAAAGCACAACGAGAAGcgaataaaaaaatagaaaaacagttacaaaaagaaagacaagcaTATAAAGCCACACATCGACTCCTTTTATTGGGGGCTGGAGAGTCTGGAAAAAGCACTATTGTCAAACAGATGAGGATCCTGCACGTCAATGGATTTAATGCAGAagaaaagaaacagaaaatccaGGACATTCGGAAAAATGTGAAGGATGCCATAGTGACTATAGTTTCGGCGATGAGCACTTTAATACCCCCAGTTCCATTAGCCAACCCAGAGAACCAGTTCAGAATGGACTACATCAAAAGTATAGCTCCTCTTTCTGATTTCGATTACACGCAG

Function

symbol description
gnal Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-activating dopamine receptor signaling pathway and sensory perception of chemical stimulus. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Is expressed in brain; gill; head; and peripheral olfactory organ. Human ortholog(s) of this gene implicated in dystonia 25. Orthologous to human GNAL (G protein subunit alpha L).

NR:

description
PREDICTED: guanine nucleotide-binding protein G(olf) subunit alpha isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019281 True 387 mRNA 0.41 4 12324271 12325838

Neighbor

gene id symbol gene type direction distance location
AMCG00019285 NA coding upstream 36562 12286918 ~ 12287709 (+)
AMCG00019276 NA coding upstream 249168 12067601 ~ 12075103 (+)
AMCG00019275 napg,LOC108271818,LOC106590336,LOC108431250 coding upstream 257227 12062422 ~ 12067044 (+)
AMCG00019274 vapa,LOC102777368 coding upstream 393588 11924765 ~ 11930683 (+)
AMCG00019273 LOC107750901 coding upstream 423195 11888005 ~ 11901076 (+)
AMCG00019282 gnal,LOC103396682,LOC106520735 coding downstream 81540 12407378 ~ 12412273 (+)
AMCG00019283 impa2 coding downstream 105140 12430978 ~ 12440851 (+)
AMCG00019280 thoc1,LOC106600433 coding downstream 121095 12446933 ~ 12454372 (+)
AMCG00019290 NA coding downstream 246889 12572727 ~ 12598517 (+)
AMCG00019289 mib1 coding downstream 316126 12641964 ~ 12671029 (+)
G32778 NA non-coding upstream 323107 12000963 ~ 12001164 (+)
G32674 NA non-coding upstream 686391 11632358 ~ 11637880 (+)
G32671 NA non-coding upstream 876020 11377956 ~ 11448251 (+)
G32549 LOC103376870 non-coding upstream 1816208 10463163 ~ 10508063 (+)
G32490 NA non-coding upstream 2215121 10108906 ~ 10109150 (+)
G32892 NA non-coding downstream 283563 12609401 ~ 12612533 (+)
G32893 NA non-coding downstream 287447 12613285 ~ 12613926 (+)
G33075 LOC104962440 non-coding downstream 985576 13311414 ~ 13311742 (+)
G33093 NA non-coding downstream 1307864 13633702 ~ 13638171 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding downstream 1826964 14152802 ~ 14160703 (+)
G32539 NA other upstream 1914774 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 2695609 9369898 ~ 9628662 (+)
G32286 NA other upstream 2785060 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 2975452 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 3939679 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 2113415 14439253 ~ 14486706 (+)
G33283 NA other downstream 2838510 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 3228981 15554819 ~ 15626955 (+)
G33406 NA other downstream 3718104 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 5123482 17449320 ~ 17452659 (+)

Expression


Co-expression Network