AMCG00019283 (impa2)


Basic Information

Item Value
gene id AMCG00019283
gene name impa2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 12430978 ~ 12440851 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019283
ATGACTTCCGCGGATAACGCCCAGCCCTTGGAGGAATGCATGGAGGTGGCCGTCCGGGTCGCCCGCAGAGCCGGCCAGgtgattCAGGAAGCTGTGAAACATGACAAATGTGTGTCTACCAAAAGCACAGCTGCAGACCTGGTCACAGAGACAGACCACCAGGTGGAGGAGCTCATTATCTCCACCCTCAGGGACAAGTATCCGTCTCACAGaTTCATTGGTGAAGAATCATCTGCTGCCGGAGAGAAATGTTTCCTAACGGACAGTCCTACATGGATTATAGATCCCATTGATGGAACCTGTAATTTCGTACACAGtttcccAATGGTGGCAGTAAGCATTGGTTTTGCTGTGAAAAAAGAGCTTGTATTTGGTGTCATTTACCATTGCTTCGACGAGACCTTATACACTGCTAGGAAAGGACATGGGGCATTTTGCAATGGCCTAAGGCTTCAGGTATCAAAGGAAAAAGATGTGTCTAAGGCCCTGATTTTAACAGAGATTGGCGCAAAGAGAGATCCAGAAACACTGAAGATATTTTCTGGGAACATAGAGAAGCTCCTCAAAGCACACGCCCATGGCATCCGTGTGATTGGCAGTTCCACGCTGGCTCTATGCCAGGTGGCGTCAGGTGCAGCCGATGCCTATTACCAGTTTGGACTCCACTGCTGGGACATTGCAGCAGCTGCCATCATCATCAGGGAAGCTGGGGGGAGTGTGGTAGACACTTCAGGCGGACCTCTGGATCTGATGTCTCGCAGAGTAGTTGCCGCTGGAACGATGGAGATGGCCACTTACATAGTTCAGCAGCTTCAGGAAATCGACTACGAGCGAGACGATCACCAAGCACATTGA

Function

symbol description
impa2 Predicted to enable inositol monophosphate 1-phosphatase activity. Predicted to be involved in inositol metabolic process; inositol phosphate dephosphorylation; and signal transduction. Predicted to act upstream of or within phosphatidylinositol phosphate biosynthetic process. Is expressed in brain; central nervous system; epiphysis; optic vesicle; and retina. Human ortholog(s) of this gene implicated in bipolar disorder and schizophrenia. Orthologous to human IMPA2 (inositol monophosphatase 2).

NR:

description
PREDICTED: inositol monophosphatase 2

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process

KEGG:

id description
K01092 E3.1.3.25, IMPA, suhB; myo-inositol-1(or 4)-monophosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019283 True 855 mRNA 0.50 8 12430978 12440851

Neighbor

gene id symbol gene type direction distance location
AMCG00019282 gnal,LOC103396682,LOC106520735 coding upstream 18705 12407378 ~ 12412273 (+)
AMCG00019281 gnal,LOC107554377,LOC107732066,LOC107667176,LOC106520735 coding upstream 105140 12324271 ~ 12325838 (+)
AMCG00019285 NA coding upstream 143269 12286918 ~ 12287709 (+)
AMCG00019276 NA coding upstream 355875 12067601 ~ 12075103 (+)
AMCG00019275 napg,LOC108271818,LOC106590336,LOC108431250 coding upstream 363934 12062422 ~ 12067044 (+)
AMCG00019280 thoc1,LOC106600433 coding downstream 6082 12446933 ~ 12454372 (+)
AMCG00019290 NA coding downstream 131876 12572727 ~ 12598517 (+)
AMCG00019289 mib1 coding downstream 201113 12641964 ~ 12671029 (+)
AMCG00019293 mib1,LOC106600429,LOC107747519,LOC107691191,LOC107550435,LOC107681781 coding downstream 267714 12708565 ~ 12722210 (+)
AMCG00019295 NA coding downstream 327103 12767954 ~ 12778615 (+)
G32778 NA non-coding upstream 429814 12000963 ~ 12001164 (+)
G32674 NA non-coding upstream 793098 11632358 ~ 11637880 (+)
G32671 NA non-coding upstream 982727 11377956 ~ 11448251 (+)
G32549 LOC103376870 non-coding upstream 1922915 10463163 ~ 10508063 (+)
G32490 NA non-coding upstream 2321828 10108906 ~ 10109150 (+)
G32892 NA non-coding downstream 168550 12609401 ~ 12612533 (+)
G32893 NA non-coding downstream 172434 12613285 ~ 12613926 (+)
G33075 LOC104962440 non-coding downstream 870563 13311414 ~ 13311742 (+)
G33093 NA non-coding downstream 1192851 13633702 ~ 13638171 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding downstream 1711951 14152802 ~ 14160703 (+)
G32539 NA other upstream 2021481 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 2802316 9369898 ~ 9628662 (+)
G32286 NA other upstream 2891767 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 3082159 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 4046386 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 1998402 14439253 ~ 14486706 (+)
G33283 NA other downstream 2723497 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 3113968 15554819 ~ 15626955 (+)
G33406 NA other downstream 3603091 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 5008469 17449320 ~ 17452659 (+)

Expression


Co-expression Network