AMCG00019291


Basic Information

Item Value
gene id AMCG00019291
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 12600533 ~ 12613847 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019291
AAAACTTTCAGTGCGCCGAAGAAACAGCTGCGACCGAGAAACAGAGAGGAAAGTGAGCGCAGTCATCGCTATTAACACCGCCAGTGTGTGCACAACCACGGTGGGAATATAAATCGCTGTTTTGGATCTCATTCTGGGTGTTTTTGGAGATAATCGAGTTAGCCgtgtttttcctcctcctcctcttcgtcAGCTGGCTGGTCTTCCTGCGTCCGTCGCTGACGTGCAGGACCGGGTCCAAATAATGCACCGTCCACAGCGCGGTCCACTTCAGTGTCTGTGCCCGAGTTGAGCTCATGGACACTGGATGTTTCCTGAAGGTCCCGCAGAGACAACTGAAAAGGATGCCAACTCAGAAAAGAACATCAGCTTCACTGGAGTCTCAGGCCAAGAAGAGAAAAGTAGAGCAGAAGGCAGTGGCTACACAGCCCAAGAGAAATCCGCTAAGAACTCTTGTCTGTCCTCGTGCCAAGAAAAAGCCACCCGCTTTGCAGAAAGATACAAAGAAACTCGCGACAGCACTTAGTAGCAGGAAGCCTGTACGACAGTCCTCTAGGGTTAAGATTAACCAGCAATCTGCTGCAGAGAACGAGCTAAAACCTACGGAAGAGACGGGTGAGGAAGGGAAAAGTTCGAGGACTAGGATGAAAACGAACCCTAAATCTGACGCTCAGAAGAAAAAGAACTCTGCAGGTGTAAAGTCATCATCGAGCAGGTCTTTGCAGAGAGCGTGCCAGTCGCGGCCAGTGCAAAGTGCAAACAGCTCTTTAAGAAGAGCACGAGACATTCTGCTCAAGAAGTCAAAAGGCAAGGCTTCGGCATCTAGATTAAGAGGCCGGAATCAGGTGTCGGGGAGAAAGGCCTCCAGGAAGTCCAGCAAGTCCTCTGGCAAAAAGGAAGTAAAGTCGGAAGGAATGACAAAAAAAGCAGATGCCCCCCCAAGACCGGAAGGTAATAAAAGGGAATCTTTGAGACTGAGCGTCGAGGATACGCCTGTAAGGACTCTGCGCAATCGAGAGGGAAAAGCGGCTTCGTCTGACCGGGGACCAGCACAGAAAAGAAACCGATTGGACACAGGTTCTCCCATTGatctgaagaagaagaagaaagattgTTCTGTGCCTAAGGAAAATGCAAAACGGCGGATTTCtagaaaaaatgacaacaaaggCAAAGGACTTCAGAATTCCCCGGGCTCTAAAGTCTCAGAAGAGGATGGCAAGGTGGCCTTCAAGAAGGTTGCGCTCTCCACAAAGCAAAGCCTAAGTAAAACTCAAGATGGGAAGAATGCTCCGAGACAAAACTGCAAAGCAACTGTGGATGTGTCTAAGGAAACATCACCTGGCACGAAAGGGAAAAAGAATATGAGCAGGGAAACCAAACGGACCGGTCTGAAAAAGGCCTCCCCTCCGTTGGTGGCACTTCTGAAAGTTATTAAGGAATCAAATCTATACAAGACCTCATCTACTGCGAAAGGTGATGCATGTATAGCAGACGCACAGGGCCTGAACAGATGTTGCACTGATCCAAATATTTTAGAGAAGCTTAAAATGGATGCAGATGAATCCAGTGAAACTGCAAGCCATGAAGGTAAAACGAGCTCCAAGACGCTAGCAACTGAAGCGGCTGTGGGCTCTGATACTACAGACACGAACAGTGATGATAAGAAACAGAATATTTCAGTTCCTGGAAAGAATACAGACTCATCTGTGTTACAGGTGGTCGAAAATAAGAGTTGccttaaaacaaaagtgttgCAAGGAGCAGCTGAGAGAGACTCTTGTTCTTCAGATCAGCTGAATGATGAGGGGCAGGCAGATAAAGGCTCCTTGCCTGTACAGTCTCAGGAAGATTCCTTGAGTAAAGCTGGGCTGCCTAATATAGGGAAACAGATctcaaagaaaaccaaagccAAACAAGCTCCTCCAAAAAGGCAGGAAATGAACCCTCAAGCTAAGACGAAGGCACGGCTTGCAGCACTCGCCGAGGAGAAGGCTGCGGCATCGAAGAGGGCTGCCAGGCAGTTGAATTTACTGGCTTTGTGTGAGGAGATAGCTGACGATATTGCCTCGGACACAGTGGAGGTGAAGAAAGAGGAGGAAGGCGCCGTGTCGGAGCAAAGCAAGCTAGAGACCGCGGGGGTAGAGCCCAAGGAGGAGTCCGAGGCTGTTGGTGACAGTCCGGTCTTGGAGGCAGCCTGTCCATCTGTGCCCCCGGCTAATACTCCGCAGGAGGAACCGAAGAGgcgcttcttcttgagccaaaTCGCAGTGCCTTTGAAAAGCAACGAGAGAAAGAAGCCTTCCCGGTTCCAGAGACTGCGGCAGACTGAAATTCAGCGGGAGCATCTGAGCTGGACTCGAGTGAAGCAGCTGAAAACGGAGCAAGCCGCGCAGAGGACCGTCCTGAGCAGTGAGCCTGTACCAAAGGCAAGTGTGCTGCCCACTCCGCCCgccctctctctgcctgccaCTGCCACCACGCCGAAGGAGGCACAAACGGAAAACAAGCCACAGCCCGCTGTCACAGTGCCACTGTCTAACGGTGGAGTGGGCAGCAGCGTTAAGTTGGTGGAGTACAAAATTTACAAACCACGAGTTAAATATTCAGCGGATGACTTTGAACTTGATGGAATGGAAGAGGAGCCTAAAACAGCACCTGGAAAAATCGCAGACACAGCACTTAGTGTggcaagtttaaaaaaagaggCTGCATCACAGGGCTCTGTGCTCTCGGTGGATTCCAGACCAGCTGCCTCCCCTCACAGCAGGGGACTCCCTCCAGTGGTGCAAGACAAGCTGCAAGACGGCCATGATTCTGATGTGGCAGAACACAAGCTTCCAGCCAAGACCGACCTCGCCAATGTGACTTCCTCTGAAACCTGCAAGGCATTGCTGTCCAGCCAGTCGTCTGGAATAAGAAGTGAAAGCCCACTGTCTGATGCCAGGTTGCACAAAGAAATTAAGAAGTTAAAGGAAGCAGAGAAGGATGGTACTCAGCAAACTGTAATAgACGCCGGGCAGAAGCGCTTTGGGGCCGTCACGTGTGCAGTGTGTGGAATGTTGTACTCGGCAGCCAACCCGGAGGATGAGTCCCAGCACCTGCTGTTCCACAACCAGTTCATCAGTGCCGTGAGATATGTGgggtggaaaaaagagagaatttTGGGAGAGTATCCAGATGGTAAAATAATTCTGGTTCTTCCAGATGACCCAAAGTATGCCCTGAAAAAGGTGGAAGAGATCCGGGAGATGGTGGACAATGACCTGGGCTTCCAGCAGGGCTTCAGGGTGATCGAGGAGCAGGGGCCCGAGGGCTCGGAGCGGGAGAAGCTGATGTTCGAGCGGCAGAGGGCCTGGTGCTGCTCCACCACCCCCGAGCCCGCACTGTGTGGCATCAGCCGCATCTGGGTGTTCAGCATGATGAGGCGGAAGGGCATTGCCTCCAGGATGATCGACTGCTTGAGGAGCACCTTTATCTACGGGTCTTACTTAAGCAAAGAGGAAATTGCGTTCTCCGACCCCACGCCTGACGGGAAGCTCTTCGCCACACATTACTTCGGGACTTCCCAGTTCCTGGTCTACAACTTCGTCAGTGGGAGTCGCTCTCCGCAGCCCAAAGCTACCGTTGACGATTAGGGTCTTTTGAGCATGCCAGTATCAGTGCATTGACATCACTGGAATATTTTCTAATGGTTCAAAACCGGTTATTTGCAAATGGCCACCAGGAAGAACTTAGAAGGGCGTTGTTTAGTTGAGTCATTAGGAGAtgatattttctgttattttattgttttacagaaacaataGAATTGAGCTTTGCTTAACAACATTTAAAGCTGTTGAAACCACACTTGTCTTGGTAAAGTGTGAGAGAgggatacattttcaaaaactcaGGTCTAGGAAACAGCCAGgtggttgttttaaaataacggagtcaacatttttttaagttttccttttcttctcatAGCTCTTCAGTATTTTGGGACAAAAGCctattttgttaatgtgtatttttaagagaagataatgtattttattgaatttaacaattacaaaaatgtttacatGCATGGTACTTTTGACACTGAAAAGTCAGACCAATCCCAAAAGCTTTAACTGTGCTAGGTTTTTGATTTTTATAAAACCTTATTTGAAGGCCCCTCCGGGCTTGTCTAGCTCGAGTAAATGAGGCAGAGCGGCATAATCCTTGTGTTTGAAACATCTGTCCCATAAAAGTGGATGGATGAAGTTCAACATTGTATTGCTGAAAAATGCCTGTCCAAGAAAGTGAGAGCGTGCGTTTGGGTTGTTCTTTCTGTCGCAAAGACGAGAACAACAGTGCCGTCTTCAGTAGTGCTTGGCTGTGATGGTTAATAGGCCGACTAAAACCCCtgggttttctatttttttggcAGGCGGTGCTGTTAGTGCACTTTTCACTGTTTTTAAGGCACTTTTCAGGCTTATAGAGAGGCAGACAGCCACAAAtcccattgttttctgtttttccacatGATGGTGGAAGCAGTGGTTCACAGGGCACAGGGTGCTCATGTAAGCTTCCCCTAGATCAGAAGAGAATTAAATGCTTCTTGTTAAGCTGAACCCAATTATATGTGCCCTTGGAGGGTCTTATCTGTGGTGATTTGGGTTggtgattgtgttttgttttgttttttgtttgttttactccaGAAGAGACTTCTGGAAAATTGTGTTGGAATTGAGAAGAGTTTAGCTTATTTCATGATTAGTATCTCAGTGAGATGCAAAGTTTTAACTGGCAGATGAAAGTAATATAGGACGTTTGTCTGGTATATTGACTTACTGTGTGTTTCACCCATTAGGATCTAAAGACCAAACTGAGCTTGTACTGACCGGCCTCATGGGCCCTTGCAATTCATTCCCCCAAGCCAGAGCTGAACTCTCCTTCCCAACGCAGAGACCTTGTAAAGGTCTTGGAGAAGTCTGTCAATCCCAAGAGGAAGGCTTGGATTTGATTATGGTCTATGCAGTTCTCTTTATTTATAGTTGGTAGAAAATACTGCAGGGAAAACAGTCCATGTTTGTATGAAGAGCAATATTTTCATTCCATATTTGAAACCTTGCAGCTTTGTTGAACctgtttgttgtttgtctttgtttttccctttgtgtGATGAAAACTGCTGTTCTGTTATTGGTTGAACATTTCTGACACCGCTGACTGGGCTAAGATCTGGCCCCGTTATTGTCTGAGAGCTCTGGACTCGCAATTGTCTCATTTACACTGCTTTGTCAAAAAAAGAGTGGGGAGGGGGAAGCACGTTGCCCTGTGCAGAAACTGGCCCCTTGGCTAAACTTCAAAAATCTAGTCCCTGTtttcaagaataataataaactgcttACAGTTATATAAACAACatagttaaatatttttcattaaaaaaatacaataaataaaaccacgaGACTGCAGCAGGCCTGGCTTTGTTCGTTACAGTGCAGCGCACTGCGGCTACACTCAGCAGCAGCTGTATGGGATTAACCCTTTGTAGTCTCGTGTCAGAGCTAGTGCCACTGTGATCTGACAGAAGCCACTAAGTGAGTGTCCAGCTCTGGCTGAGCGGGAGCCAGTGTGGGATGGTGAGCACAGGGAAGGCCTTTAAGACCCTGCACTGGGCCTGGGCTCACCACAGACACGCAGGGCAGCGCTGTGAGAGAAGCACAGACCGATGCCGAGGATTTGGTCATATTAGAGCTAGAATATAATTATGTGGGTGTCGGTAGATGACCGTCAGATCGTATTCCTATTCACAGTTGTTCATCCAAACATACCCTTTCAACCTGTAGTTGCTTCATAACTGATCAACTAATTGTAGCTGAATATCAGAACattgtgtaatgtattttctcaGGAAAATAAGCTGTGCCTGACCAGCCCGTCAGTTCCTCCATGCATTGATTGTAAAGGCTTAATTCTGGAGTTCACACAGACTAGCTGCCTGGTGTTTGGGTTTATATTTGGTTAGTATAAGTTCTTGCATTTAAATTCTATAAAGCCCATTCTTCCCCTAGAAAAAGTCTATACAAGGATCTGTATAGCACCTTGTACATCATAGAAGCCTTTGAGTTTTAAGACTCCAAATCGCAAATCTAAAAGTATTTGTCAACTTCCCCTGAACCAATATTATAATGCCAACAATAGACCTTTATCATTTGCTATTTAAAGAATGTGATTCTTTGTTAAAACTTTGTACTGTATAGTGAGTGTATCgactgatatttaaaaatatttttatggatagatatatttaatagtaaCAATTCATAATTTgtgacaatattttaaatgaaaacgtATTTCTCTATGTATAAAAGATTATGGTTTTGTGAGTGGACAGAACTTTACACAGCaattggaaatacatttttgagggGGAAGTGTGTTTGCCCCGACGTTGATGTGTTTTTGATCGAGTGCGAACAGTGAGATCTCTGTGCAGACAGACGTGGGAAGCGAACGCAGGCCGCAGTGCGGGCGGTGGTCCGCCGGGCAGCTCGGCGTTTGGCACAGCAGTGTATGTCCTGGGAGGGTTACTGAATATCATCCACAAATGCATGGCATCAAATAGCCTTGTCAGTTTGGAGACTAATCTCTTTTCGGCGTGAAGCCAAACCGCACTTCATTCGGAGCTGGATGTTCCTCTCGTACCCAACTGTGTGTATGCAGTATTTGttccagaatttaaaaaaactttaaaatatgtatgaagtttaaaataactaatttgtaattttatctgtaatgtaaatagtgttatttcattaaaaagaaatgtaaaaaaacaaacatgattttttttttt

Function

GO: NA

KEGG:

id description
K11268 ESCO, ECO1; N-acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019291 True 6856 mRNA 0.46 10 12600533 12613847

Neighbor

gene id symbol gene type direction distance location
AMCG00019287 rock1,LOC106569322 coding downstream 95983 12466126 ~ 12504550 (-)
AMCG00019286 usp14,LOC106569325 coding downstream 136541 12455079 ~ 12463992 (-)
AMCG00019288 NA coding downstream 155347 12442688 ~ 12445186 (-)
AMCG00019279 piezo2 coding downstream 461926 12078562 ~ 12138607 (-)
AMCG00019278 NA coding downstream 547315 12052660 ~ 12053218 (-)
AMCG00019292 abhd3 coding upstream 2300 12616147 ~ 12635259 (-)
AMCG00019303 NA coding upstream 325160 12939007 ~ 12965910 (-)
AMCG00019302 NA coding upstream 371900 12985747 ~ 13006328 (-)
AMCG00019301 ankrd29,LOC106613857 coding upstream 394915 13008762 ~ 13018024 (-)
AMCG00019311 NA coding upstream 590577 13204424 ~ 13208267 (-)
G32844 NA non-coding downstream 146906 12452597 ~ 12453627 (-)
G32825 NA non-coding downstream 233307 12366786 ~ 12367226 (-)
G32786 NA non-coding downstream 533481 12062278 ~ 12067052 (-)
G32784 NA non-coding downstream 540282 12059624 ~ 12060251 (-)
G32779 NA non-coding downstream 599368 12000950 ~ 12001165 (-)
G33030 NA non-coding upstream 490106 13103953 ~ 13106250 (-)
G33070 NA non-coding upstream 641516 13255363 ~ 13257313 (-)
G33076 LOC104962440 non-coding upstream 697656 13311503 ~ 13311800 (-)
G33092 NA non-coding upstream 1019439 13633286 ~ 13633502 (-)
G33132 NA non-coding upstream 1467868 14081715 ~ 14081918 (-)
AMCG00019284 NA other downstream 177213 12413154 ~ 12423320 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other downstream 714962 11852108 ~ 11885571 (-)
AMCG00019213 NA other downstream 3166419 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 3698655 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 5916232 6680625 ~ 6684301 (-)
AMCG00019312 NA other upstream 554589 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 1048269 13662116 ~ 13665230 (-)
G33163 NA other upstream 1878044 14491891 ~ 14558290 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other upstream 2337995 14951842 ~ 14991996 (-)
G33381 ube2v2,LOC107732116 other upstream 3078635 15692482 ~ 15721452 (-)

Expression


Co-expression Network