Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019296 |
| gene name | cables1 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 12905474 ~ 12916716 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| cables1 | Acts upstream of or within nervous system development. Is expressed in nervous system. Orthologous to human CABLES1 (Cdk5 and Abl enzyme substrate 1). |
| description |
|---|
| PREDICTED: CDK5 and ABL1 enzyme substrate 1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019296 | True | 582 | mRNA | 0.52 | 6 | 12905474 | 12916716 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019300 | NA | coding | upstream | 22948 | 12881981 ~ 12882526 (+) |
| AMCG00019297 | rbbp8,LOC107732059 | coding | upstream | 32420 | 12858980 ~ 12873054 (+) |
| AMCG00019295 | NA | coding | upstream | 126859 | 12767954 ~ 12778615 (+) |
| AMCG00019293 | mib1,LOC106600429,LOC107747519,LOC107691191,LOC107550435,LOC107681781 | coding | upstream | 183264 | 12708565 ~ 12722210 (+) |
| AMCG00019289 | mib1 | coding | upstream | 234445 | 12641964 ~ 12671029 (+) |
| AMCG00019298 | cables1 | coding | downstream | 10066 | 12926782 ~ 12928334 (+) |
| AMCG00019294 | LOC107599736 | coding | downstream | 54259 | 12970975 ~ 12977312 (+) |
| AMCG00019299 | clg21h18orf8,LOC106916022,LOC103129440,LOC101473408,LOC104932202 | coding | downstream | 61583 | 12978299 ~ 12985783 (+) |
| AMCG00019305 | NA | coding | downstream | 90393 | 13007109 ~ 13030766 (+) |
| AMCG00019304 | NA | coding | downstream | 114936 | 13031652 ~ 13112713 (+) |
| G32893 | NA | non-coding | upstream | 291548 | 12613285 ~ 12613926 (+) |
| G32892 | NA | non-coding | upstream | 292941 | 12609401 ~ 12612533 (+) |
| G32778 | NA | non-coding | upstream | 904310 | 12000963 ~ 12001164 (+) |
| G32674 | NA | non-coding | upstream | 1267594 | 11632358 ~ 11637880 (+) |
| G32671 | NA | non-coding | upstream | 1457223 | 11377956 ~ 11448251 (+) |
| G33075 | LOC104962440 | non-coding | downstream | 394698 | 13311414 ~ 13311742 (+) |
| G33093 | NA | non-coding | downstream | 716986 | 13633702 ~ 13638171 (+) |
| G33141 | cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 | non-coding | downstream | 1236086 | 14152802 ~ 14160703 (+) |
| G33153 | NA | non-coding | downstream | 1368849 | 14285565 ~ 14286016 (+) |
| G33161 | NA | non-coding | downstream | 1575176 | 14491892 ~ 14492206 (+) |
| G32539 | NA | other | upstream | 2495977 | 10404639 ~ 10409497 (+) |
| G32293 | armc4 | other | upstream | 3276812 | 9369898 ~ 9628662 (+) |
| G32286 | NA | other | upstream | 3366263 | 9261374 ~ 9539211 (+) |
| AMCG00019215 | mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 | other | upstream | 3556655 | 9329479 ~ 9348819 (+) |
| G32130 | itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 | other | upstream | 4520882 | 8345455 ~ 8384592 (+) |
| G33159 | LOC103376870 | other | downstream | 1522537 | 14439253 ~ 14486706 (+) |
| G33283 | NA | other | downstream | 2247632 | 15164348 ~ 15169841 (+) |
| AMCG00019345 | NA | other | downstream | 2638103 | 15554819 ~ 15626955 (+) |
| G33406 | NA | other | downstream | 3127226 | 16043942 ~ 16081943 (+) |
| AMCG00019376 | NA | other | downstream | 4532604 | 17449320 ~ 17452659 (+) |
