AMCG00019300


Basic Information

Item Value
gene id AMCG00019300
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 12881981 ~ 12882526 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019300
ATGGCGGCCGCCACCAGCTCCAGCGCGGCCACCCTGCAGATCAAGCCCCCCAGCATCGAGAGGAAGCGCATCGACCCGCGGCGCAGACAAGCGGCGCTCTCCTTCCTCAGCAACATCTCCCTGGACGGCCGGCCGGTGCAGGATGACGGCGACAACTCCGACGGGGCAGTTGAAGCCCGGACTAGACCGAGCCTGGTTTCTGCAGAGAGGGCGATGTATCCGGCGGCGGCGGCCCAGGCGCTCGCTGCTGCGAACCAGGCTCTGCTGTACAGTAACGCCCGCAGCAGTTTCGGGCTGAGCTCGGTGGCAGCCCCGCTGTGCGCCGACGCGGAAAACGATGGCTTCGGCTGCGGGGTGCACGCCGGGCAGCCCGCTTTCAGCTCCCCGTACCCCGCAGTGTCCGCGGCGGCTGCCAGGGGGAGGCTGCAGACTTTCACTCAGGGAATCCTACCTGCCACCTTTGCCAGGCAGCAGCCTCAAAATTACTGCTGCATGGACGCGGGGCAGATCGGCAGCACTGCCTTTGAGCTGCAGAGATCCAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019300 True 546 mRNA 0.67 1 12881981 12882526

Neighbor

gene id symbol gene type direction distance location
AMCG00019297 rbbp8,LOC107732059 coding upstream 8927 12858980 ~ 12873054 (+)
AMCG00019295 NA coding upstream 103366 12767954 ~ 12778615 (+)
AMCG00019293 mib1,LOC106600429,LOC107747519,LOC107691191,LOC107550435,LOC107681781 coding upstream 159771 12708565 ~ 12722210 (+)
AMCG00019289 mib1 coding upstream 210952 12641964 ~ 12671029 (+)
AMCG00019290 NA coding upstream 283464 12572727 ~ 12598517 (+)
AMCG00019296 cables1 coding downstream 22948 12905474 ~ 12916716 (+)
AMCG00019298 cables1 coding downstream 44256 12926782 ~ 12928334 (+)
AMCG00019294 LOC107599736 coding downstream 88449 12970975 ~ 12977312 (+)
AMCG00019299 clg21h18orf8,LOC106916022,LOC103129440,LOC101473408,LOC104932202 coding downstream 95773 12978299 ~ 12985783 (+)
AMCG00019305 NA coding downstream 124583 13007109 ~ 13030766 (+)
G32893 NA non-coding upstream 268055 12613285 ~ 12613926 (+)
G32892 NA non-coding upstream 269448 12609401 ~ 12612533 (+)
G32778 NA non-coding upstream 880817 12000963 ~ 12001164 (+)
G32674 NA non-coding upstream 1244101 11632358 ~ 11637880 (+)
G32671 NA non-coding upstream 1433730 11377956 ~ 11448251 (+)
G33075 LOC104962440 non-coding downstream 428888 13311414 ~ 13311742 (+)
G33093 NA non-coding downstream 751176 13633702 ~ 13638171 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding downstream 1270276 14152802 ~ 14160703 (+)
G33153 NA non-coding downstream 1403039 14285565 ~ 14286016 (+)
G33161 NA non-coding downstream 1609366 14491892 ~ 14492206 (+)
G32539 NA other upstream 2472484 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 3253319 9369898 ~ 9628662 (+)
G32286 NA other upstream 3342770 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 3533162 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 4497389 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 1556727 14439253 ~ 14486706 (+)
G33283 NA other downstream 2281822 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 2672293 15554819 ~ 15626955 (+)
G33406 NA other downstream 3161416 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 4566794 17449320 ~ 17452659 (+)

Expression


Co-expression Network