AMCG00019301 (ankrd29,LOC106613857)


Basic Information

Item Value
gene id AMCG00019301
gene name ankrd29,LOC106613857
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 13008762 ~ 13018024 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019301
tgtgtgagagagagagagagagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggagcacTGCagtgcctgcctgcctgcatgGCTCCGGATCCCACGACACTGACAGCACTCCAGCAAGATCCGAAAACACGGCGTGTGAGCGGGGCTGCAGGGCAGGGAGTACCGTGGCCATCGAGACAGGACACTGAGATGCGTCTCTCATGAGTCTTGCAGCATGTCTTTCAAGAAGGAAACACCTCTTGCCAACGCTGTATTTTGGGCAGCAAGGAAGGGGAACTTGGCTCTCCTGCAGTTACTATTAAATAGTGGCCGAGTAGATGTGGACTGCAAAGACAGTTTTGGAACCACGGCTCTGATGGTAGCATCCTACAGTGGACACTACGAGTGTGTCAGAGAGCTGATCATGCAAGGCGCAGACATCAACCTGCAGAGAGAGaCAGGCTCCACTCCCCTTTTCTTCGCTGCGCAGCAGGGGCACAGTGACATCGTGAAGCTGCTGTTTGAGTTCGGAGCCTCCACTGAATTTCAGACAAAGgATGGTGGTACAGCCTTATCAGCAGCCTGTCAATATGGTCACTCTAAAGTGGTGGAGACCCTGTTGAAATATGGTGCTAATGTCCATGACCAGCTGCACGACGGTGCCACACCGCTCTTCCTTGCTGCCCAGGAAGGACATGTTACTGTAATACGACAACTTCTGTCTTCAGGAGCCAAAGTCAACCAACCGCGAGATGGGCCAGTACAGTGCTCAAGCTCAGGAGCTACCCTTGTCTTCCAGGATGGTACGGCTCCACTCTGGATGGCCGCTCAGATGGGACACAGTGAGGTAGTGAAGGTCCTGTTACTCCGAGGAGCTGATCGAGATGCTGACAGAAAAGATGGGTCTACAGCTTTATTTAAGGCTTCTCACAAAGGGCATAATGATGTCATTGAAGAACTTCTTAAATTTTCCCCTTCCCTCAGCCTTCTTAAGAATGGATCAACAGCCCTCCATGCAGCAGTGTTGGGAGGAAATGTTAGATCAGTGGTGCTATTACTTGGAGCTAATGCGGACCCTACACTAAGAAATACGAATAACGAATTACCTGCCGACCTTACAAAAAATGAACGCATTCTGAGAGTATTACGGACAAAACTATCCAATAGAACTAGTTGATGACTCTCGATGGTTTATACCAATGGCTGTGGAGTCCAAGAAGAGCACTTAGGTCCTGTCAAAGAAGGTCTCTGAGGGACACAGCGTCATTCCTGGCGACACCAATGAGATTCCAGTTCTTGCTTCCAGTTACAGCTTAAGAGAGCGTGCATTAATGAATAGCCATAATGTAAAATCAGGAAAGTGATTTACAAGTCtgatatgaaatgaaaatcatCAGCTTTGTACAAGTCGAGATTTCTGTATATCTCCTTTGTTCGAAGGTTGATGCAATCTATGCTAAATATTTTTctcagaactttttttttctctctcctggtgctgtatatttcttaatattttgcGAGTTTAAttgctgtgtttgtaataaataaactggaTGTTTGTGGAGT

Function

symbol description
ankrd29 Orthologous to human ANKRD29 (ankyrin repeat domain 29).

NR:

description
PREDICTED: ankyrin repeat domain-containing protein 29 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019301 True 1550 mRNA 0.47 10 13008762 13018024

Neighbor

gene id symbol gene type direction distance location
AMCG00019302 NA coding downstream 2434 12985747 ~ 13006328 (-)
AMCG00019303 NA coding downstream 42852 12939007 ~ 12965910 (-)
AMCG00019292 abhd3 coding downstream 373503 12616147 ~ 12635259 (-)
AMCG00019291 NA coding downstream 394915 12600533 ~ 12613847 (-)
AMCG00019287 rock1,LOC106569322 coding downstream 504212 12466126 ~ 12504550 (-)
AMCG00019311 NA coding upstream 186400 13204424 ~ 13208267 (-)
AMCG00019310 znf521 coding upstream 439015 13457039 ~ 13471322 (-)
AMCG00019313 NA coding upstream 464168 13482192 ~ 13537109 (-)
AMCG00019315 ss18 coding upstream 611981 13630005 ~ 13661038 (-)
AMCG00019318 kctd1,LOC103479566,LOC108239680 coding upstream 715941 13733965 ~ 13739371 (-)
G32844 NA non-coding downstream 555135 12452597 ~ 12453627 (-)
G32825 NA non-coding downstream 641536 12366786 ~ 12367226 (-)
G32786 NA non-coding downstream 941710 12062278 ~ 12067052 (-)
G32784 NA non-coding downstream 948511 12059624 ~ 12060251 (-)
G32779 NA non-coding downstream 1007597 12000950 ~ 12001165 (-)
G33030 NA non-coding upstream 85929 13103953 ~ 13106250 (-)
G33070 NA non-coding upstream 237339 13255363 ~ 13257313 (-)
G33076 LOC104962440 non-coding upstream 293479 13311503 ~ 13311800 (-)
G33092 NA non-coding upstream 615262 13633286 ~ 13633502 (-)
G33132 NA non-coding upstream 1063691 14081715 ~ 14081918 (-)
AMCG00019284 NA other downstream 585442 12413154 ~ 12423320 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other downstream 1123191 11852108 ~ 11885571 (-)
AMCG00019213 NA other downstream 3574648 9251152 ~ 9434114 (-)
AMCG00019209 LOC106600477 other downstream 4106884 8847151 ~ 8901878 (-)
AMCG00019165 NA other downstream 6324461 6680625 ~ 6684301 (-)
AMCG00019312 NA other upstream 150412 13168436 ~ 13188292 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other upstream 644092 13662116 ~ 13665230 (-)
G33163 NA other upstream 1473867 14491891 ~ 14558290 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other upstream 1933818 14951842 ~ 14991996 (-)
G33381 ube2v2,LOC107732116 other upstream 2674458 15692482 ~ 15721452 (-)

Expression


Co-expression Network