AMCG00019305


Basic Information

Item Value
gene id AMCG00019305
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 13007109 ~ 13030766 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019305
ATGGGGAGTCCGCTGTGCTTCGCAGGAACTCGCAGTCGCACGGAGCGGTGGCTCACATACCTTTGTCTGAAATTCAGTGGAGGCTCCGAACTCAAACAGCAGCTTCACGATGTCACTGTGCCCCTGCTGCGCAGCGAAGAAAAGGGGACCAGAGTCTCCGAACCTCCTATACCACACAGACCACTGACACCTGAAGGACTCCACACCAGTAGGTTCATCATGAAGGCCCTCATCTTTTGGGCTTTTTTATGCCATTACCTCAGCGTTGTGTTGTGCTCAGATGAAGAGATAGATATTGAATGGCAGACCTGGAAAAGAAGCTTTGGAGTGTCTTACCGTGAGAAGGGCAATGAAAATCAGAAGAAAGCCATTTGGGAAGATAACTTCAAGGCAATTGAAGAGCATAATGAGAAAGGCactaagacatttaaaatggcCATGAACAAATATGGAGACCTTAACCAGGAAGAGTACAAACGCCTGCAAGGCTCACAAATTAACAGCCAAGCAAGGAGAAACAGTCCGATAGTGTCTCCTCACAAGCTTCGTGTTGCAGCCAGCAAACTGAATGTTGCCAGGGTCGACTACAGAGCCATGGGCTACGTCACAAATGTGAAGGACCAGGGTTACTGTGGCTCCTGTTGGGCATTCAGTACGACAGGAGCCATTGAGGGACAGATGTTCAAGAAGACAGGCAGGCTGGTACCCCTCAGTGAGCAGAACTTAATGGACTGTTCTCGCTCCTTTGGGACCTATGGCTGTAACGGAGCCTGGATGGCGAATGCATACGATTACGTAGTGCAAAACGGTGGGCTGCAGGCTGAAGCCACCTACCCCTATACGTCAATGGATAACCAGCCTTGTCAGTATGACAGCAGCAAGTCGGCTGCCACAATCAAAGACTACAGATTCATTCCTGCAGGTGATGAGCAGGCATTGGCTGATGCAGTGACAACTATTGGGCCAATCACAGTTGCACTGGATGCAGACAACCCCAGCTTCATGTTTTACAGCTCAGGAATCTATGAAGAACCCAACTGTGACCCAAGCAATCTAAGCCATGCTGTACTATTGGTGGGATATGGTTCTGAGGGAGGTACAGACTACTGGATTATTAAAAACAGTTGGGGCACTGGCTGGGGTGAAGGTGGTTACATGAGAATgatcagaaataataaaaatgcctGTGGAATCGCAAGCTACGCCCTCTATCCTGTAACTCCATTTCAGCAGCTGGCACAGTTTCAGCACTGCCTGATCTCCATGGCAGAATTCAAGGAAAGGGCGGAAGGAAAAGGAATGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019305 True 1305 mRNA 0.49 11 13007109 13030766

Neighbor

gene id symbol gene type direction distance location
AMCG00019299 clg21h18orf8,LOC106916022,LOC103129440,LOC101473408,LOC104932202 coding upstream 21326 12978299 ~ 12985783 (+)
AMCG00019294 LOC107599736 coding upstream 29797 12970975 ~ 12977312 (+)
AMCG00019298 cables1 coding upstream 78775 12926782 ~ 12928334 (+)
AMCG00019296 cables1 coding upstream 90393 12905474 ~ 12916716 (+)
AMCG00019300 NA coding upstream 124583 12881981 ~ 12882526 (+)
AMCG00019304 NA coding downstream 886 13031652 ~ 13112713 (+)
AMCG00019307 LOC106584358,LOC106613856 coding downstream 110845 13141611 ~ 13149184 (+)
AMCG00019308 NA coding downstream 123054 13153820 ~ 13162062 (+)
AMCG00019309 NA coding downstream 184190 13214956 ~ 13236826 (+)
AMCG00019306 NA coding downstream 261952 13292718 ~ 13310822 (+)
G32893 NA non-coding upstream 393183 12613285 ~ 12613926 (+)
G32892 NA non-coding upstream 394576 12609401 ~ 12612533 (+)
G32778 NA non-coding upstream 1005945 12000963 ~ 12001164 (+)
G32674 NA non-coding upstream 1369229 11632358 ~ 11637880 (+)
G32671 NA non-coding upstream 1558858 11377956 ~ 11448251 (+)
G33075 LOC104962440 non-coding downstream 280648 13311414 ~ 13311742 (+)
G33093 NA non-coding downstream 602936 13633702 ~ 13638171 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding downstream 1122036 14152802 ~ 14160703 (+)
G33153 NA non-coding downstream 1254799 14285565 ~ 14286016 (+)
G33161 NA non-coding downstream 1461126 14491892 ~ 14492206 (+)
G32539 NA other upstream 2597612 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 3378447 9369898 ~ 9628662 (+)
G32286 NA other upstream 3467898 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 3658290 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 4622517 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 1408487 14439253 ~ 14486706 (+)
G33283 NA other downstream 2133582 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 2524053 15554819 ~ 15626955 (+)
G33406 NA other downstream 3013176 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 4418554 17449320 ~ 17452659 (+)

Expression


Co-expression Network