AMCG00019308


Basic Information

Item Value
gene id AMCG00019308
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 13153820 ~ 13162062 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019308
ATGAAGACAGACACAACTCCTTCAGTGTTGGTTGTGCCACGGGGCCTGAGGACATTTCTGGTGAACCTGACCAAGGCTGTGGTTAAGGAACAACCAGATGAAATCTCTCAGTTCATCAGCTCTTACCTCATTGAGCTCCTAAGTACACATTTACAACCACAATACCAGAAAGACATCGCTGACTCAGTGACACCAGAAGCAAACAAACCATCTCCAGCAACAATGCCGTCTGAGGGACTTCATGAGATAACCCACGTCACAGGAACAACTTCGCCAGCTCCTGCTAGCCCATCAGTTGCTCACCAATCAGCAGTTTTCCAGAGGGTTCAATCAGAAGAATTTGTTGACTCTCCACACACACTTTTAGTCAACACAAGTACCATTCCCTCTGAGAATATAGTCGTCGTGGTTTGTAAGAATCTTCCTGAAATAGTAATATTCCAAGCTGAAGTGAAACCCCCAATGGAAAATGTAGAGCAGTCGCTCACATCAGAAATGACTCCTGAAGCAGTTGTGTTCCACAGAGTTCCTTCAGTTCAGGAACTGCCTCCATCATCATCAGTTCTGGATCAGATTCCATCCTCTCCTCTGGAACGATCTTCTGATCATGTGACCTGCACTGAAAAGGTTCCTGAAAAGCTAGCATCCCAGAGTGAAATGAACAGTGAGACAAATGTCACGATCACAATCACCTCTGTGGGACAAATACCCTGTGAAATCGATGAAACACCAGATATGGAAACAATGACAGAAATGACTGAAAAAGATCAAGAACCTTGTGAAGCCGAGGCTCATGTGCCTCCCCAGGCTAGCGATGTGTCAGCAGATGAGCACAGTGAGCTGAACAAAATGCCCTCTCTCAGGACAGCTGGTCAGGACGGGGGTCTGGAGGAAGAGCCAGAGATGCCACAGACTGAAGAAAAGCAAACCGttACCAATCAGCAAGAGAGAGATCAGGATGTTTTGAAGGAAACTGGCAGTTTGAATGCAGATGAAGATGTGGGACTTGGTCTGGATAATTCAGCGCAGCAGGTTTTGACTTTATATCATCTGGCAAATACAGCCGAGGAAGGAACATTATCCACATCATTTTTATCACTTCCTCCTTTCAATGGCACTGCTCTCATTAGAGTGTTTGGGCCTGGACACGTTGTATTATCACAGCAGCCAGAAACGACAGCTCTTGGGCAAAAACATATTCTTCTTCAACCTGCTCTGATGCACAACCATGGTAAATGACAGCCCCAGACCAGAACTAAGGAGAAATGTTGCTGTCAACCTGCAAGACTCTTAAATGTTACTATAGATGAAGGAAACATGCTTTTTCCTCAAGCAGCACATTACTGAATGACTTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019308 True 1357 mRNA 0.45 4 13153820 13162062

Neighbor

gene id symbol gene type direction distance location
AMCG00019307 LOC106584358,LOC106613856 coding upstream 4636 13141611 ~ 13149184 (+)
AMCG00019304 NA coding upstream 41107 13031652 ~ 13112713 (+)
AMCG00019305 NA coding upstream 123054 13007109 ~ 13030766 (+)
AMCG00019299 clg21h18orf8,LOC106916022,LOC103129440,LOC101473408,LOC104932202 coding upstream 168037 12978299 ~ 12985783 (+)
AMCG00019294 LOC107599736 coding upstream 176508 12970975 ~ 12977312 (+)
AMCG00019309 NA coding downstream 52894 13214956 ~ 13236826 (+)
AMCG00019306 NA coding downstream 130656 13292718 ~ 13310822 (+)
AMCG00019314 psma8,LOC100304914,LOC103029839,LOC105907112,LOC105011885,LOC107572146,LOC102789190 coding downstream 500160 13662222 ~ 13666577 (+)
AMCG00019316 NA coding downstream 508191 13670253 ~ 13674752 (+)
AMCG00019322 NA coding downstream 1510911 14672973 ~ 14698199 (+)
G32893 NA non-coding upstream 539894 12613285 ~ 12613926 (+)
G32892 NA non-coding upstream 541287 12609401 ~ 12612533 (+)
G32778 NA non-coding upstream 1152656 12000963 ~ 12001164 (+)
G32674 NA non-coding upstream 1515940 11632358 ~ 11637880 (+)
G32671 NA non-coding upstream 1705569 11377956 ~ 11448251 (+)
G33075 LOC104962440 non-coding downstream 149352 13311414 ~ 13311742 (+)
G33093 NA non-coding downstream 471640 13633702 ~ 13638171 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding downstream 990740 14152802 ~ 14160703 (+)
G33153 NA non-coding downstream 1123503 14285565 ~ 14286016 (+)
G33161 NA non-coding downstream 1329830 14491892 ~ 14492206 (+)
G32539 NA other upstream 2744323 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 3525158 9369898 ~ 9628662 (+)
G32286 NA other upstream 3614609 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 3805001 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 4769228 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 1277191 14439253 ~ 14486706 (+)
G33283 NA other downstream 2002286 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 2392757 15554819 ~ 15626955 (+)
G33406 NA other downstream 2881880 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 4287258 17449320 ~ 17452659 (+)

Expression


Co-expression Network