AMCG00019309


Basic Information

Item Value
gene id AMCG00019309
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 13214956 ~ 13236826 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019309
ATTGATGAAATTGAAGCACTTTCTGCTATATATGGAGACGAGTGGTGTGTGATTGATGAAGCTTCaagaatattttgtattcaaatctCAGAGAGCAAAGACAAGCCAAAATGGACACTCTGTCTACAGGTCCTTCTTCCCCCTGAGTACCCTAGTGCAGCCCCTCCTATGTATCAGCTGAAtgccCCTTGGCTCAGAGGTGCTGATCGAATAGAGCTTTCAAATAGCCTTGAAGACCTATATGCACAGAATCTCGGGGAGAGTATTCTTTATCTGTGGGTGGAGAGAATCAGGGAATTCCTGGTGGAGAAATCACAATTTGCTGACTCAGAAGGCCctgaatttaaaaagacaacagaGGAGCTGACTGATGACCTTGAGGATGATTTCAGCCCAGGACATCAATTATTAAAGCTTGAATCGGAACAAAGCCCAGCACAGTTTCTTACCGAAGACAATGGAGAATATACTGTGAGGACAAGCAGACGTTCCTACAAGATTGTGAAGACGATGGGGAGACGGCAGCAGGGGGACGACTGCTTCATCTATTACAGGTACAAACACTGA

Function

GO:

id name namespace
GO:0006417 regulation of translation biological_process
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019309 True 567 mRNA 0.45 6 13214956 13236826

Neighbor

gene id symbol gene type direction distance location
AMCG00019308 NA coding upstream 52894 13153820 ~ 13162062 (+)
AMCG00019307 LOC106584358,LOC106613856 coding upstream 65772 13141611 ~ 13149184 (+)
AMCG00019304 NA coding upstream 102243 13031652 ~ 13112713 (+)
AMCG00019305 NA coding upstream 184190 13007109 ~ 13030766 (+)
AMCG00019299 clg21h18orf8,LOC106916022,LOC103129440,LOC101473408,LOC104932202 coding upstream 229173 12978299 ~ 12985783 (+)
AMCG00019306 NA coding downstream 55892 13292718 ~ 13310822 (+)
AMCG00019314 psma8,LOC100304914,LOC103029839,LOC105907112,LOC105011885,LOC107572146,LOC102789190 coding downstream 425396 13662222 ~ 13666577 (+)
AMCG00019316 NA coding downstream 433427 13670253 ~ 13674752 (+)
AMCG00019322 NA coding downstream 1436147 14672973 ~ 14698199 (+)
AMCG00019321 NA coding downstream 1477979 14714805 ~ 14720892 (+)
G32893 NA non-coding upstream 601030 12613285 ~ 12613926 (+)
G32892 NA non-coding upstream 602423 12609401 ~ 12612533 (+)
G32778 NA non-coding upstream 1213792 12000963 ~ 12001164 (+)
G32674 NA non-coding upstream 1577076 11632358 ~ 11637880 (+)
G32671 NA non-coding upstream 1766705 11377956 ~ 11448251 (+)
G33075 LOC104962440 non-coding downstream 74588 13311414 ~ 13311742 (+)
G33093 NA non-coding downstream 396876 13633702 ~ 13638171 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding downstream 915976 14152802 ~ 14160703 (+)
G33153 NA non-coding downstream 1048739 14285565 ~ 14286016 (+)
G33161 NA non-coding downstream 1255066 14491892 ~ 14492206 (+)
G32539 NA other upstream 2805459 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 3586294 9369898 ~ 9628662 (+)
G32286 NA other upstream 3675745 9261374 ~ 9539211 (+)
AMCG00019215 mpp7,LOC107657298,LOC107584397,LOC107721969,LOC104966300 other upstream 3866137 9329479 ~ 9348819 (+)
G32130 itgb1a,LOC107566918,LOC107713907,LOC107734314,LOC107565694,LOC107653806,LOC106590025,LOC104924090,LOC106578567,LOC105019428 other upstream 4830364 8345455 ~ 8384592 (+)
G33159 LOC103376870 other downstream 1202427 14439253 ~ 14486706 (+)
G33283 NA other downstream 1927522 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 2317993 15554819 ~ 15626955 (+)
G33406 NA other downstream 2807116 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 4212494 17449320 ~ 17452659 (+)

Expression


Co-expression Network