AMCG00019324


Basic Information

Item Value
gene id AMCG00019324
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 14914025 ~ 14927971 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019324
ATTTACTCAGTATTACAGGTGTCTAACATGTACGCTCCAGAGTTTACAATGAGTTCATTTTTGAATGCCAGGGAACACATCCTATCAGCAAAGGGCAAAGTTTTACACTTCCAACATATATTTAAGGAAAACATTAATGCTGTTGTCTGACTTTCTGGGACTAAGCCCATACAGAATGGCTTCTTACTCTGCCTTTCTCATTTTGAGTTTGTTTCTTCAGCATGCCTTGCTTCTGAAACAGGGCAGAAACTCCATTTTGGGTGATCAATACAGGTGGCCAAAAACAATCCCATACTACCTGGAAGACAGTGTAGaaataaatgccAAAGGAGTTATCTTGAAGGCCTTTGAACAATATAGgctaaaaacatgtattgacTACAAACCCTGGACTGGAGAGCCCAACTATATTTCAGTCTTTAAAGGCAGTGGGTGCTTCTCTTCTGTTGGGAACCGTCATGTGGGAAAACAAAGACTTTCGATTGGAAGCAACTGTGATAAAATTGCCACTATCGAGCATGAATTTCTCCATGCTCTGGGATTCTGGCATGAGCAGTCAAGATCTGACCGAAATGACTATGTCACAATCATGTGGGATCGTATTTCAGCGGGCAAAGAGCACAATTTTAACATGTACAATGACACAGTGTCTAGTTCATTGAATGTAGCATATGACTACAACTCCATGATGCACTACAGCAAGACCGCATTTCAAAATGGAACAGAACCGACCATTGTCACAAAAATCCCTCACTTCAGCAATGTGATTGGTCAACGCATGGAATTCAGTGACACATCATCCATAACATTTATGGAGCAATGCAGTTTTGAGTTGGAAAATATCTGTGGCATGATCCAAGGCACAGCTGATAATGCTGACTGGCAGCATGTTATGAATGTCCCTGGAAAGCCATTGACAGATCACACAAACATGGGAAAGTGCAAAGgtaCAGGCTACCTTATGCACTTCAATACAGCCACCGGCAGTGTGGGAGACAAAGCTTTGTTAGAGAGTAGGATACTGTACCCCAAAAGAGGCTTCCAGTGCTTACAATTCTTCTATTATCACAGTGGAAATAAAGATGAtgaactaaatatatatgttcGAGAATATGATGAAGCCACTCCTCAAGGAATACTGAAGCTCGTGGAGAAAATCATAGGAAGAAAAGGAGCACTAAGTTCATCTGGAGGCTTCTCAATTGATGATATTAACCTATCTGAAACAGAGTGCCCTACTCATATGTGGCACATAAGAAATTTCACACATCTCTTAGCAGAAAGTCTCCCTGGACAATCTGGAAAACTTTATAGCCCGCGATTCTACTCTGCTGAGGGATATGCTTTTCAGAttggtttgtatttaaatggtaCCACTGATAATCCAGGTAACCTTgccatatatttatatctaacGTCCGGTGCAAATGATGACCGACTGCAATGGCCCTGCCCATGGAAACAAGCAACCATGGTACTGTTGGACCAACATCCTGACATACGCCATAGAATGtcaaaccagagaagctttACTACCGATCCTACAGAGAAGAAAACTGAGAGTGGAAACACATACTTTTTTTGGGATAACCCTCAGAAAGTAGGGAAACTGGTTACAGATTCTGATGGAACTACATATCACCGAGGTCCAGGAAGAGGCACCAGTTCATTCCTAACTCATCTAAGACTGATGAACAGAGACTTTATAAAAGGAGAcgatgtttttttcctcttgtcCTTCGAAGACATTTCAAGACTTCTAGTTTCTCAGCCACTTCCACCCACTACATTAACTCCTCCAACTACAGTCACAACCAGCCAGCCAAACATTACCATAGAGCTCTGCAAGACCAACATCTGTGAGAATGATGGCATTTGTGTTGTTGAACAAGGGAAGTCTGTCTGCAGGTGTGCCGTAGGTGATGACTGGTGGTACACAGGGGACAAATGTCAGAGTAGAGGACGATCCCAGGACGCGGTCACCACTGCTGTGGCATCATCCATGTCAGTGTTTGCAGCCATGTTAATAATCACTGCAGTGAGTGTGTTTTGTCTGaagaagaaatataataaacaactgAAGGACAAGAACCAAGGAATGATCATGGAAAATaaacacacaaacaaggtATGAAGAAGAAACCTGGAACTCCAAATCAATCCATGGAATCTTAAAACACTTTACAGAAACTAATCAGCTTcagcaaaacacattaaataaatcctaTAGGCCTACCATTAAATCATGCTAGATATTTTATTAGTAGGTCTCTAACAAAGTTGCCTGAGGAACAACTTTGTAgttgaaaattaatttgaaaccaTGCTATTCAatgaatgtttattaaatattgttcaatAAGTCAATTACACCTTTGCACAGTTTCATGAACATTAATACAGCCTAGAGAAATCTATAGATTCCTGTTGACTGAGTAGCATTAAGACAGGGCGTGTAATTGGTTTTACCACTTCATAGAGAAATCAACAACTATAAGTGGAAGAGGGATGAAAAAAGTACGCTCACGGGTTTTATTGACATACATGCgaaacattacaaaaagtgGGGGAAGATATTAAAgttctttaaacaaaacatcaggTTCTAGATCAGAAAAATAACATCTTCTGACACCATCACTTGATTGTCATCCTGCATCTGGTTGAGGAGCTTTTTTACTTCGTTCATCTCAAAAGAGTCACCACAGTCTTGATTGATATTCGTGACCAGCTCAGAAACTGAGATAGACTGGGATCGAGTCCCTTTGAATGCTTTCAGAAGTGTGGCCTTAAAAACTTTCAGTCTGAATTAAggagaaaaatacacattagGACAATTAAAATTTCATATGAAAATTCAGTGAGGGTGGGTGGCAAATTTTAATTAACAGCAGTATCATATGCCATGAAGATCTAATAAAAGCACTATGAGGTAAAATATTGGTTCAatttttcattacaattaacgtatatttttttttaattatagaaaaatgtgctggtttgttttgctttttgccACTGTGCAACAATTGTAATAGTCTGtgtatacaaaataagcaggacccttattaaaatgacaattataaaacaaaaataaaagtgtatacCTGTCAAGGCCAACATCtgactttttctttattgtgcTTCTCGGCTCTGCTGGTTTGCGTTTTTGACTGGAACCTGCTACAGTACAA

Function

GO: NA

KEGG:

id description
K08606 MEP1B; meprin B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019324 True 3197 mRNA 0.39 12 14914025 14927971

Neighbor

gene id symbol gene type direction distance location
AMCG00019331 NA coding upstream 6547 14903342 ~ 14907478 (+)
AMCG00019325 NA coding upstream 12179 14896825 ~ 14901846 (+)
AMCG00019321 NA coding upstream 193133 14714805 ~ 14720892 (+)
AMCG00019322 NA coding upstream 215826 14672973 ~ 14698199 (+)
AMCG00019316 NA coding upstream 1239273 13670253 ~ 13674752 (+)
AMCG00019323 NA coding downstream 10969 14938940 ~ 14945227 (+)
AMCG00019337 NA coding downstream 291250 15219221 ~ 15228776 (+)
AMCG00019336 NA coding downstream 312551 15240522 ~ 15255397 (+)
AMCG00019342 NA coding downstream 508344 15436315 ~ 15479736 (+)
AMCG00019347 mapre2 coding downstream 592455 15520426 ~ 15529911 (+)
G33161 NA non-coding upstream 421819 14491892 ~ 14492206 (+)
G33153 NA non-coding upstream 628009 14285565 ~ 14286016 (+)
G33141 cdh2,LOC102201754,LOC101473079,LOC102787731,LOC103371087 non-coding upstream 753322 14152802 ~ 14160703 (+)
G33093 NA non-coding upstream 1275854 13633702 ~ 13638171 (+)
G33075 LOC104962440 non-coding upstream 1602283 13311414 ~ 13311742 (+)
G33307 NA non-coding downstream 556107 15484078 ~ 15533196 (+)
G33392 NA non-coding downstream 1000598 15928569 ~ 15931201 (+)
G33404 NA non-coding downstream 1074825 16002796 ~ 16003201 (+)
G33408 NA non-coding downstream 1172987 16100958 ~ 16101159 (+)
G33422 NA non-coding downstream 1438143 16366114 ~ 16366342 (+)
G33159 LOC103376870 other upstream 427319 14439253 ~ 14486706 (+)
G32539 NA other upstream 4504528 10404639 ~ 10409497 (+)
G32293 armc4 other upstream 5285363 9369898 ~ 9628662 (+)
G32286 NA other upstream 5374814 9261374 ~ 9539211 (+)
G33283 NA other downstream 236377 15164348 ~ 15169841 (+)
AMCG00019345 NA other downstream 626848 15554819 ~ 15626955 (+)
G33406 NA other downstream 1115971 16043942 ~ 16081943 (+)
AMCG00019376 NA other downstream 2521349 17449320 ~ 17452659 (+)
AMCG00019402 NA other downstream 4077053 19005024 ~ 19021412 (+)

Expression


Co-expression Network