AMCG00019330


Basic Information

Item Value
gene id AMCG00019330
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 14776808 ~ 14782550 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019330
ATTTGCTCTTTATTTGGAAACAGCACACTGCTCTATATTTCttacaaaaagaaacatctgtTAAAGCCAGCGGAAATTTTCATTGTCAACCTTGCCATCAGTGACCTGGGAATGACTGTGACTTTATATCCTCTAGCGATAACATCCAGCATATCTCACAGGTGGCTGTTTGGTAAAACAATATGCTTAATCTATGCATTCTGCGGGGTTCTATTTGGAATTTGCAGTCTTTCAACACTAACCCTTCTTAGCACAGTGTGTTGCATGAAAGTGTGCTATCCTTTGTATGggaacagatttaattttgatcATGGCCGCTTGCTGATTGCCTGCGCCTGGGCATATGCACTGGTCTTCGCATGTTCTCCATTGGCCCATTGGGGTGAATATGGTCCTGAACCCTACGGCACAGCATGTTGCATTGACTGGAAGTCCTCCAATACAGAGGCAGTGGCAAAATCATACACTGTAGtactttttctgtgttgtttcatTATACCTTGTGCAATAATCATTGCTTCTTATACACAAATACTGATAACTGTAAAAGAATCCAGGAAAGCCGTAGAACAGCATGTATCACCACAAACAAGGATGACAAATATCCAGAGCATCATTGTAAAGCTGAGTGTGGCAGTTTGCATTGGCTTCTTTGCTGCATGGAGTCCTTATGCAGTGCTGTCCATGTGGGCAGCTTTCGGCTATGTCGAAAATTTTCCTCCATTAGCTTTTGCAGTGCCAGCTGTGTTTGCTAAATCCTCTACACTTTATAATCCCATCATCTACCTACTGCTCAAGCCAAACTTCAGGAACATTTTGTCCAAGGATTTTGGAGTGCTACAGCAACTGTGTCTGAGGAACTGCTTCTGTGTGAGGAGCTTACAGAAATGCAGCTACAGGTCAATCATAGAAGTCAGCTTAAAGaccttaaaaaggaaaaatggatCCAGTACCACCTCTGTGCATTTGGGCCATGGCTGCTCAAGCTGTACCTGTGACAAGTGCAGTgacacatttgaatgttttagaAACTACCCAAAAAGCTGCCAGGTAAACATAAGCACTGTGCAAATTACTCTTCAGGAAAGAACTTCACTGGAGCCAATACAGCAACCAAAAATGCGCCAGACTGCCAAGAAATCGGTTAGAGTTGTTGTCCGAGGGAAAAGGAGTTCAGAAATTAACAGCTTGGAGATAACACTGGAGACGGTGCCAGCACAGATAAGAGCTGCTAATCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019330 True 1239 mRNA 0.43 4 14776808 14782550

Neighbor

gene id symbol gene type direction distance location
AMCG00019326 b4galt6,LOC104925469,LOC106560385 coding downstream 45161 14720859 ~ 14731647 (-)
AMCG00019327 NA coding downstream 138576 14616919 ~ 14638232 (-)
AMCG00019320 cdh2 coding downstream 597094 14152717 ~ 14179714 (-)
AMCG00019319 NA coding downstream 952180 13817357 ~ 13824628 (-)
AMCG00019317 LOC107735723 coding downstream 1017990 13749854 ~ 13758818 (-)
AMCG00019328 NA coding upstream 54680 14837230 ~ 14895216 (-)
AMCG00019329 LOC107559729,LOC107553429,LOC104958571 coding upstream 144151 14926701 ~ 14937229 (-)
AMCG00019332 NA coding upstream 211258 14993808 ~ 15000069 (-)
AMCG00019333 klhl14 coding upstream 220902 15003452 ~ 15018066 (-)
AMCG00019334 klhl14,LOC106599787 coding upstream 247803 15030353 ~ 15031231 (-)
G33206 NA non-coding downstream 58575 14714791 ~ 14718233 (-)
G33204 NA non-coding downstream 78396 14692705 ~ 14698412 (-)
G33132 NA non-coding downstream 694890 14081715 ~ 14081918 (-)
G33092 NA non-coding downstream 1143306 13633286 ~ 13633502 (-)
G33076 LOC104962440 non-coding downstream 1465008 13311503 ~ 13311800 (-)
G33268 NA non-coding upstream 279224 15061774 ~ 15062351 (-)
G33282 NA non-coding upstream 379162 15161712 ~ 15161967 (-)
G33285 NA non-coding upstream 400230 15182780 ~ 15184537 (-)
G33291 NA non-coding upstream 471482 15254032 ~ 15256023 (-)
G33393 NA non-coding upstream 1075627 15858177 ~ 15931208 (-)
G33163 NA other downstream 218518 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 1111578 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 1588516 13168436 ~ 13188292 (-)
AMCG00019284 NA other downstream 2353488 12413154 ~ 12423320 (-)
AMCG00019272 ppp4r1,LOC106579644,LOC106590337 other downstream 2891237 11852108 ~ 11885571 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other upstream 169292 14951842 ~ 14991996 (-)
G33381 ube2v2,LOC107732116 other upstream 909932 15692482 ~ 15721452 (-)
AMCG00019396 NA other upstream 3602317 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 4512262 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 4659845 19442395 ~ 19454969 (-)

Expression


Co-expression Network