AMCG00019332


Basic Information

Item Value
gene id AMCG00019332
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 14993808 ~ 15000069 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019332
TGGGAAACGCGTTTTAATGGAAACCAGCACCTAGCACCAGGGCATAAGATACACTATTATACAAACATCGCTTCGTATttttgatattaatttaaatgactgtTTTTACATGGGAGTCCTCGTTAGAAAAATGGGACGGAAATGCACCTGCTACAATGTACCGAGTAGAAGTAACTGAACTGAATGACAGGTCGTGGTAAATATACATAAGTTAGTATGTGTAAACTGCGTTTTAGATCAAATATAATCTATACTAAATACGTTAACATGaggaattaattttaatgttcaACATAAATGTGTCAGTTGCAGTTAAAATGTCCTGGTTTCGTAAATTGGGTAATGAAACTTTAATCCGGATACTACATACGTAAGGAGTGCTATGAAAGGTCAAAACGCTTAGAGGTGGCTGGTTAGGTATGGGGGGATGGATGAAACGTCAggttttctgttattaaaaatcattttggTTGGAGACTCTTTGGTTGGGAAAACCTGCATACTCCAGAGATATATTGATCACAACTTTAATCATTCGTATGTGTCGACTATCGGCATTGATTTCAAAGTGAAGACATTACACGTAAATGGCAAATTCATTAAACTGCAGATCTGGGATACAGCTGGGCAAGAGCGGTTCCACACCATTTCAACACGCTATTTTCGTGGAGCCCATGGCCTTTTAATTATCTATGATATCACAAATGTATTAAGCTTCGACAATGTTGTCTGGTGGATGAAAGATGTTGATGTGaATGCTGGAGAGAATGTTGACAGGATCATTTTAGGCAACAAATGTGACCTGGAAGATAAGAGGGTGATCTCTAAAGAAAAAGGACAGCAGCTTGCCTGGGAGCATGGAGTCAAGTTCTTTGAAACAAGTGCAAAGGATAATATTAATATAGAGCAGGCTTTTTCTATTCTAGTGGAGGATATACTAAAGAAGAATTATTCCTATGGTGAAAAACCTGATGTAGTGAACCTTAAAAAGcctgagaagaaaaaatgttgtaGCCGCTGAACCTTCAGAGTGCTGCTGGCCTCATGCTGTTTACTTGAAGCtcaccaatttatttttttatgtacatacaGAATTCAGGCACTGGAATGTCCATCAAAGATTCCTCTGCAAGAAATCTTTATCTTCTAGTATGTGGTGGAAAACAACTCTGTAGGTCTATTCATATCCTAGTGTATCATATATTAATGATACCTTGTTGAATATAACAGATACTGTATGTTTCGTACTGGTATTGATAttcaacatttttgtatttgactaTGCGACCCATCATTGTGAGTTTTCTGTCAAATAAGGGGACATTCAGCAAACATccatcacaaaatacacacaaaacaggaaGAGAGATGTACTCATCATTGCCTGTTGGGGGTTCTTATTCAACATAGGGCTGTCTTTTACCGTGGTGCTGCATTATACCACTATATACCATTATACCAGTTTTATGTTATGATCTGATGctgatttctattttatttccctATCTAGAggaatgtaaaacatttgtttagaatgttatttaaattgaatttgcaattggtaaaattttaaaaacatatgtaatgtaaaaatgtgatgtaaaatCCCGAAACTCATTTAGTTGTGTAATATCAGTAAAGTGAGATATGTTTATTAGTAACTAAGTATGGCTATTATGATCCTCTGTAGTTAATGCATTGCAGTTACTGAATATATTTACAAACTTGAACATGAGAACAGTGCTCATTTTAACACTCAACAAATGGttagatcatttatttatttatgtatttatttgtctaaaCCTATGTATTCTACTGGTTATAAAAAAGggggtgttttaaaatgtttgttttttccagagttgCTACAGCAGCTATCACCAGGCATTTGCAATATCGATTCTGACCTGATGAGGTCGCCAGAGTTCCATTTCTTGTACATTGATCTCTTCCATTTGTGTcttattacattcatatttactaTGTTTTTATACTGTGTACAAATTGACAAAATTGAGAATCTACTGTAAAGGCTGTTTTGTTTGAGTAATtagattaattataattatatatgctGAA

Function

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019332 True 2082 mRNA 0.35 6 14993808 15000069

Neighbor

gene id symbol gene type direction distance location
AMCG00019329 LOC107559729,LOC107553429,LOC104958571 coding downstream 56579 14926701 ~ 14937229 (-)
AMCG00019328 NA coding downstream 98592 14837230 ~ 14895216 (-)
AMCG00019330 NA coding downstream 211258 14776808 ~ 14782550 (-)
AMCG00019326 b4galt6,LOC104925469,LOC106560385 coding downstream 262161 14720859 ~ 14731647 (-)
AMCG00019327 NA coding downstream 355576 14616919 ~ 14638232 (-)
AMCG00019333 klhl14 coding upstream 3383 15003452 ~ 15018066 (-)
AMCG00019334 klhl14,LOC106599787 coding upstream 30284 15030353 ~ 15031231 (-)
AMCG00019335 NA coding upstream 138233 15138302 ~ 15153516 (-)
AMCG00019339 NA coding upstream 305854 15305923 ~ 15314117 (-)
AMCG00019338 NA coding upstream 337602 15337671 ~ 15343274 (-)
G33206 NA non-coding downstream 275575 14714791 ~ 14718233 (-)
G33204 NA non-coding downstream 295396 14692705 ~ 14698412 (-)
G33132 NA non-coding downstream 911890 14081715 ~ 14081918 (-)
G33092 NA non-coding downstream 1360306 13633286 ~ 13633502 (-)
G33076 LOC104962440 non-coding downstream 1682008 13311503 ~ 13311800 (-)
G33268 NA non-coding upstream 61705 15061774 ~ 15062351 (-)
G33282 NA non-coding upstream 161643 15161712 ~ 15161967 (-)
G33285 NA non-coding upstream 182711 15182780 ~ 15184537 (-)
G33291 NA non-coding upstream 253963 15254032 ~ 15256023 (-)
G33393 NA non-coding upstream 858108 15858177 ~ 15931208 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 1812 14951842 ~ 14991996 (-)
G33163 NA other downstream 435518 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 1328578 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 1805516 13168436 ~ 13188292 (-)
AMCG00019284 NA other downstream 2570488 12413154 ~ 12423320 (-)
G33381 ube2v2,LOC107732116 other upstream 692413 15692482 ~ 15721452 (-)
AMCG00019396 NA other upstream 3384798 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 4294743 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 4442326 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 5743461 20743530 ~ 20765496 (-)

Expression


Co-expression Network