AMCG00019339


Basic Information

Item Value
gene id AMCG00019339
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 15305923 ~ 15314117 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019339
TCCCCGGCGCACAGCTACTCCAGCTACGATTCAGGAAAGAACGAGAGTGTGGGCGGCGGAGTGGAGGACCTGTCCCTCAGTCGtgctgatgaagatgatgatgatcacGATGACCAGGAAGACTGTGAGAAGGCCATGGAGGCTGAAGGAGTGGAGGCTGAGAGACTCAAGGCCTTCAATATGTTTGTCAGGCTGTTTGTAGATGAGAACTTGGACCGCATGGTCCCAATATCTAAGCAGCCCAAAGAAAAGATCCAGGCTATCATTGACTCATGTAGGCGACAGTTCCCTGAGTATCAGGAACGTGCCCGGAAACGTATTCGCACTTACCTGAAGTCCTGCAGGAGGATGAAAAGGAATGGTTTTGACGCGGTGAGTCCCACAAACCCAGACCCAGCCTGCATCAAAACCCTGCCATGCACAAATACCCttcctttaattatgaCACTTTTCATTAAATCCCGGCCTATTCCTTCACACCTTacttcagcagcagcagagaaCATTTTGGCCTCGGCCTGTGAGAGTGAAAGCAGGAATGCCGCTAAGAGGATGCGCCTGGACAGACCACAG

Function

GO:

id name namespace
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019339 True 573 mRNA 0.51 4 15305923 15314117

Neighbor

gene id symbol gene type direction distance location
AMCG00019335 NA coding downstream 152407 15138302 ~ 15153516 (-)
AMCG00019334 klhl14,LOC106599787 coding downstream 274692 15030353 ~ 15031231 (-)
AMCG00019333 klhl14 coding downstream 287857 15003452 ~ 15018066 (-)
AMCG00019332 NA coding downstream 305854 14993808 ~ 15000069 (-)
AMCG00019329 LOC107559729,LOC107553429,LOC104958571 coding downstream 368694 14926701 ~ 14937229 (-)
AMCG00019338 NA coding upstream 23554 15337671 ~ 15343274 (-)
AMCG00019341 NA coding upstream 43891 15358008 ~ 15358663 (-)
AMCG00019340 NA coding upstream 45583 15359700 ~ 15360068 (-)
AMCG00019343 NA coding upstream 219118 15533235 ~ 15551028 (-)
AMCG00019349 NA coding upstream 314372 15628489 ~ 15630001 (-)
G33291 NA non-coding downstream 49900 15254032 ~ 15256023 (-)
G33285 NA non-coding downstream 121386 15182780 ~ 15184537 (-)
G33282 NA non-coding downstream 143956 15161712 ~ 15161967 (-)
G33268 NA non-coding downstream 243572 15061774 ~ 15062351 (-)
G33206 NA non-coding downstream 587690 14714791 ~ 14718233 (-)
G33393 NA non-coding upstream 544060 15858177 ~ 15931208 (-)
G33419 NA non-coding upstream 957950 16272067 ~ 16311866 (-)
G33461 NA non-coding upstream 1304185 16618302 ~ 16618691 (-)
G33531 NA non-coding upstream 1729901 17044018 ~ 17044239 (-)
G33532 rgs19,rgs20,LOC103135694 non-coding upstream 1735397 17049514 ~ 17049746 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 313927 14951842 ~ 14991996 (-)
G33163 NA other downstream 747633 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 1640693 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 2117631 13168436 ~ 13188292 (-)
AMCG00019284 NA other downstream 2882603 12413154 ~ 12423320 (-)
G33381 ube2v2,LOC107732116 other upstream 378365 15692482 ~ 15721452 (-)
AMCG00019396 NA other upstream 3070750 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 3980695 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 4128278 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 5429413 20743530 ~ 20765496 (-)

Expression


Co-expression Network