AMCG00019343


Basic Information

Item Value
gene id AMCG00019343
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 15533235 ~ 15551028 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019343
TGCCAGCGGAGGGGAAGGCAGGACAGCCGGGCGGCCGGGCGGGCGGGCGGTGTTCACCTGCTGTCTGCTCAGGAAGTGACGCAGCCTGTGTGCGTTAAGTTGGTAGTTGCCGTGAGGATTCAGGCTCCTGCTGCCCCTCGCCGCCCAGCCTAACAAACCCCTAACACATCACCGGGCGAAACTGGCAATCAGAGCCGGGGGAAGATGTTCAACTACCAGTATGTGACGCCGCAGCAGCTGGCCGGGTTTGACAGATACAAGtacAGTGCCATGGATACAAATCCACTGTCAGTGTATGTCATGCAGCACTTGTGGAACAGGATAGTCAAGGTTATTCCTCTGTGGATTGCTCCTAACTTATTAACGTTTACTGGATTTGTactgattttattaaattacttcatGTTGTCTTATTTTGACTGGGACTACACAGCTTCAGGTCCTGGTTCAAATCATGCTCCGAACTGGGTATGGGGTGTGTCTGGCCTTGCTACATTCTCTGCCTATGCATTAGACTCTATAGATGGCAAGCATGCTCGGAGGACCCAGTCCAGCAGCCCCCTGGGAGAGCTTTTTGACCATGGTCTGGACAGCTGGGCCACCTCActcttctctctgtccctgttcTCTGTGTTTGGGATCAGTCCTGAGAGAGCAGTGTCTGCATACACCCTCTACACTGTACTATGCATGGTCCTGCTCACTTTCTTGCTCTCACACTGGGAGAAATACAACACTGGTGTGCTCTTCCTGCCGTGGGGATACGATATAAGCCAAGTGACATTAACAGCAGTGTATCTGCTGACGGCAGTAGTCGGGGTAGAAGCGTGGGCGCACAAGAATGGCACATTACAGAGAGACTCCCTGTACGAGGGCCTCCTCCCATTGCTCTCGCCCGGCCTGCTCTTTGCGCTGCTCACAGCCTGGGTAATGGTGTCACCCGATGACGTTTTATCTAAACACCCCAGGCTGTTCCTCTGGATGACAGGAGTTGCCTTCTCTAATGTTACAtgtcgCCTTATTGTTTGTCAAATGACAAACACGAGGTCAGAAGCCTTTCACTGGCTCTTGCTCCCATTAGCGGCGGTCATCGCTGGCCTGTCAGCAGGGCTCTGGGTGCAGAGGGAGTTTGCCGTACTGGTGGGCTACTCTGTGCTGGTGACAGTAGCCCATGTCCACTATGGGGTGTGTGTGGGGAAACAGTTGAGCGAACACTTGAACATTTATGTCTTCTCTTTGGGGAAACCCCATCAGCAGTGAGCACATTATTACACTGACAGAGGCCTGGAGGATCCTTCTTTGACCCAATGCAACCGAGCGATACACTGGAACATTCAATGGGACTGTATTTAAAGACCAAAGGGTTCATAAAAAGAGGATACAGAGCTGAAGTTCCGGTTCTTGATGAAGGAGGAAATGACAAAAGCTGTTATCAATTGTATTTTAGGAGTGTATTGTTACTTCTCAGGTAAGCAAGCTAGAGACTATTAAAACGTAGGTACGCAAGTGTCAGTGTAATGTTTTAGCAAGGAAGGAACTCTGGGAAATACTGTATTCTGTTAATATTTGGGGAATATTTACATAACCCTGTAAACAAGTTCTGACCGTTTTCTAACTCTTTATTAATTAGCCGCTGCCAACAGCATTCCACTGCCAGTACCCGAGAAAgccagcagcacagcacagataaGCAGCCCACACGCTCCGCGGCGGTGTTCAGAGATGTGTGGAGGGCTATTTTTAGAACCGAGACCTTGTTCTCATGGATTTAGTTTGAGAAAAATGCAGGATACAAAATGGCTGTTTGCAGATTTCTGCAGCATCCCCCTGAGATTCTGTAGTTAATGACTGCTGAATGAGGCATGACCATGATTCACACAACAAGCACATTCAAGAAATAAATTGGGCATTAAGTATGAAACGTGGTTTAACTTGGCATTTTGAAGTTGTACATCCCCCCACATTATATTTAGAAGACTGAGATTATCAGTATAGGcactaaataaacacagatcCCCGAGAGCTGCCACTTCCCACAGATGTTTCCTTAATAAGTGGGTTGAAATTAGTAAGTAAATTATAATTCTCCAGATAAATGCTTAAGCCATGTggagtagatttttttttttttgtcttctcaATTTGCCTTAAACACTTATCATCCAGCCAGTCAGACAGAGGAAGGAACTTTTGCACCATTGTTCAATCACCTAAAGACAatttcaaactatttattttggtgtccatttattCTGAATTCCCTTCTCCAACTCTTTGGGCACCAGTTCAAACTTTACTACCAAATACGTTCCATGGGTTTAGCCTAGTGGTAGTTTTTGCCTAAACCACAAAGCCATGCAACAGTTTAACAATAGTTCAAAGTGCTCGGCTACAGAGCTGACTAACAGCCCGACTGGGAGGATTGTCCATTCGGAACAGGTCTGTGGTCAGGACTGAACAAAACTGTCTGACTGTCTTCAGGATCTGTGTTTGGCCAACATGTAAACAAGGATGTGCAAGTGTTCAATACTTTTGAGTGAAGCTCTCGAATCAGATCCCATAATATCACATGAAGCGCACAGAACGACAGGAAGGGCTCTTGTTAAGTCCTGTTCAAGAGTAAGAAAGCTGGCAAGAGAACAGACGGAAAGCAAATGCTATTGTTGCCTGTTACCATAGATGGCTTTGTGAAATGTTGAATGTACGATGTTTACAGCATTTGGATAACTGTCAGTTTTGCCCTGGTTTGCTGAACAAAAGTACCATATAGAATTTGTTCTGGTATGAAATTAGTAGTTTGGTTTTAGTGTATAagttctaaaataaaaatggcatatTTAATAGTATTTGTTTCCTCACCGTGAAAGGCTTCCAATATGTTTTGAGAGATGTGCAGTATTCTGGTTTTGCACTGACTTATAGAATGTCtgcacattacatttgttttcgaTTATTAAAACACCACATCATCTATAAACTAGTATTATAAACCAATGGTTGTGAATGCTTGTCAAGTTGTTTGAtccaattttgtatttaataaagagACTAACATGAGTGATTTCTGCTCCAGTAATGCAAATTGTTTCTTGCAgatagagaaaaataa

Function

GO: NA

KEGG:

id description
K00993 EPT1; ethanolaminephosphotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019343 True 3109 mRNA 0.45 9 15533235 15551028

Neighbor

gene id symbol gene type direction distance location
AMCG00019340 NA coding downstream 173167 15359700 ~ 15360068 (-)
AMCG00019341 NA coding downstream 174572 15358008 ~ 15358663 (-)
AMCG00019338 NA coding downstream 189961 15337671 ~ 15343274 (-)
AMCG00019339 NA coding downstream 219118 15305923 ~ 15314117 (-)
AMCG00019335 NA coding downstream 379719 15138302 ~ 15153516 (-)
AMCG00019349 NA coding upstream 77461 15628489 ~ 15630001 (-)
AMCG00019348 NA coding upstream 81454 15632482 ~ 15681330 (-)
AMCG00019351 snai2 coding upstream 312759 15863787 ~ 15864856 (-)
AMCG00019352 NA coding upstream 437135 15988163 ~ 15988928 (-)
AMCG00019356 NA coding upstream 839349 16390377 ~ 16421282 (-)
G33291 NA non-coding downstream 277212 15254032 ~ 15256023 (-)
G33285 NA non-coding downstream 348698 15182780 ~ 15184537 (-)
G33282 NA non-coding downstream 371268 15161712 ~ 15161967 (-)
G33268 NA non-coding downstream 470884 15061774 ~ 15062351 (-)
G33206 NA non-coding downstream 815002 14714791 ~ 14718233 (-)
G33393 NA non-coding upstream 307149 15858177 ~ 15931208 (-)
G33419 NA non-coding upstream 721039 16272067 ~ 16311866 (-)
G33461 NA non-coding upstream 1067274 16618302 ~ 16618691 (-)
G33531 NA non-coding upstream 1492990 17044018 ~ 17044239 (-)
G33532 rgs19,rgs20,LOC103135694 non-coding upstream 1498486 17049514 ~ 17049746 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 541239 14951842 ~ 14991996 (-)
G33163 NA other downstream 974945 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 1868005 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 2344943 13168436 ~ 13188292 (-)
AMCG00019284 NA other downstream 3109915 12413154 ~ 12423320 (-)
G33381 ube2v2,LOC107732116 other upstream 141454 15692482 ~ 15721452 (-)
AMCG00019396 NA other upstream 2833839 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 3743784 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 3891367 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 5192502 20743530 ~ 20765496 (-)

Expression


Co-expression Network