Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019352 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 15988163 ~ 15988928 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019352 | True | 411 | mRNA | 0.57 | 3 | 15988163 | 15988928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019351 | snai2 | coding | downstream | 123307 | 15863787 ~ 15864856 (-) |
| AMCG00019348 | NA | coding | downstream | 306833 | 15632482 ~ 15681330 (-) |
| AMCG00019349 | NA | coding | downstream | 358162 | 15628489 ~ 15630001 (-) |
| AMCG00019343 | NA | coding | downstream | 437135 | 15533235 ~ 15551028 (-) |
| AMCG00019340 | NA | coding | downstream | 628095 | 15359700 ~ 15360068 (-) |
| AMCG00019356 | NA | coding | upstream | 401449 | 16390377 ~ 16421282 (-) |
| AMCG00019355 | pcmtd1,LOC107732114,LOC107717289 | coding | upstream | 465812 | 16454740 ~ 16474345 (-) |
| AMCG00019357 | NA | coding | upstream | 518710 | 16507638 ~ 16552225 (-) |
| AMCG00019358 | NA | coding | upstream | 727437 | 16716365 ~ 16760441 (-) |
| AMCG00019359 | LOC107677137 | coding | upstream | 802967 | 16791895 ~ 16843567 (-) |
| G33393 | NA | non-coding | downstream | 56955 | 15858177 ~ 15931208 (-) |
| G33291 | NA | non-coding | downstream | 732140 | 15254032 ~ 15256023 (-) |
| G33285 | NA | non-coding | downstream | 803626 | 15182780 ~ 15184537 (-) |
| G33282 | NA | non-coding | downstream | 826196 | 15161712 ~ 15161967 (-) |
| G33268 | NA | non-coding | downstream | 925812 | 15061774 ~ 15062351 (-) |
| G33419 | NA | non-coding | upstream | 283139 | 16272067 ~ 16311866 (-) |
| G33461 | NA | non-coding | upstream | 629374 | 16618302 ~ 16618691 (-) |
| G33531 | NA | non-coding | upstream | 1055090 | 17044018 ~ 17044239 (-) |
| G33532 | rgs19,rgs20,LOC103135694 | non-coding | upstream | 1060586 | 17049514 ~ 17049746 (-) |
| G33533 | NA | non-coding | upstream | 1061069 | 17049997 ~ 17054332 (-) |
| G33381 | ube2v2,LOC107732116 | other | downstream | 266711 | 15692482 ~ 15721452 (-) |
| G33259 | garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 | other | downstream | 996167 | 14951842 ~ 14991996 (-) |
| G33163 | NA | other | downstream | 1429873 | 14491891 ~ 14558290 (-) |
| G33106 | psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 | other | downstream | 2322933 | 13662116 ~ 13665230 (-) |
| AMCG00019312 | NA | other | downstream | 2799871 | 13168436 ~ 13188292 (-) |
| AMCG00019396 | NA | other | upstream | 2395939 | 18384867 ~ 18441981 (-) |
| AMCG00019417 | NA | other | upstream | 3305884 | 19294812 ~ 19301547 (-) |
| AMCG00019419 | cpa6,LOC106579545 | other | upstream | 3453467 | 19442395 ~ 19454969 (-) |
| AMCG00019446 | ube2w | other | upstream | 4754602 | 20743530 ~ 20765496 (-) |
| AMCG00019487 | NA | other | upstream | 6681719 | 22670647 ~ 22744182 (-) |
