AMCG00019357


Basic Information

Item Value
gene id AMCG00019357
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 16507638 ~ 16552225 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019357
TTATTGAATCCAACAAGCTGGAACTGGGAATAATTCCAGTTGACTCCATAGCACAGGCTCTCAGTGCCTATGGCTCCATGGCAAGGAAAAGAAGTGCCCAGGAAGTCGTGTGTGGAGCCCCAGTTAACAAGAGGAAGTCTCTTCTGATGAAACCCCGCCACTACAGCCCCAGCAATGACTGTGATGAGGAGAATGAGGACCTGGCAGAAACAGAGGACAAAGACGGGCTGAGGAGCATTGACACTCCAGCAGGAAAAAAGCCTCCCATTTGGTCATGCAGTACTGCAGTCGATGTGAGCCAAGCTTCTGCTCTGCAGCAGAGCTCCGGTGGAAGCTTAAACAAAAGTCGAGGAAGCCCTGATACAGAAAAACTCCTTTGCATTAACAACTACCAAGATACTGTAGCAAAAGCCCCAGAACCACAACAATTGTCAGAGGAAGCCCCAGCTGAAAGCTCCCAGCAAGACAACGGAGTTCACtgcacacatgcagaaagtgaaagtgaagtGCAAGACCAAGTAAAGGAGGATGAAAGCAATGCCAGGATGGGAGTTCAGAACATGACTTACTGCTCTTCCGGGCATAATGAACACAGCTGTGAAAATAGAAGTGATGAGTGGAATAGTTTGCCCAAGTTTGCCCAAGCGAATGGCATGAATGGGAGTCTGTTAGAGAACACAAAAGATTCGCCGGGGAGAAACAGCAATACAAGAAAGTTTGAAGCTGACGAAACAGACTCAGATCCTGATGGTCAGACAACGCGAACAAATGGCCTGCCTGGAGGAGACCGGAGCTGTAGGAGGGACTTAAGTGAAAGTGAAGATGAGGCAGAGGTGTTGGACAGGGAGGAGGACTGGAGATCGGAGGTGTCGGAGGGCACCCTCAATTTCAGCAGAGCAAAAGGAAATTTGAGCCTCCTAGAACAGGCCATCGCACTGCAGTCTGAGCAGCGACAAGTTCTCCACAATGCTTACAAGGAAATGGAcaggtttttactggagcagaTGAGTGGGGAAAGGAGGCACCACAGGCTGATAGACATTGAAGCCAGGCAAAGCTATAATGGATGTAAAGATTCTCCACGATctgataaaaaagaaattaaatgccCTACACCAGGCTGTGATGGCACTGGTCATGTGACTGGGCTGTACCCACACCACAGGAGTCTATCTGGATGCCCCCATAAAGTCAGAGTGCCCCCTGAGATCCTGGCCATGCATGAGAATGTCCTTAAGTGTCCAACGCCAGGATGCACAGGGAGGGGGCATGTCAACAGCAACCGCAGCACACACAGGAGccTTTCAGGTTGTCCCATTGCTGCTGCTGGAAAAATTATAAAACCCCAGGATGACAGTCAGAAATGTGGACCTATTTCTGACAGGCTCCCCAGaCCTCCAGGTTTAATGAAGCAGTTTGAGACCTCTCACTACAGCTACAAGTTTTCACAGCCTGTCACCACCCTTCAGGCTAGTCTTGCAAAGGATCTTGACAAgtctttggaaaacaaactacaacaccaacaacacaaGACCAAGAAGCATCTCACTTCTCTGAATTATCCCAGCTCCCTGACATCCAACAGTCGGGTGACTATCCCCCGCGGACAAAGCCCCTGTCATTCGGCTGTCTACAGCTACAACCCTGACAGTGAAGAGGCCCacgccgctgctgctgctgctgctattcTCAACCTCTCTACCCGGTACAGAGGCAACATCGATGGAATCACTATGAGGCCTCAGGCCCCCTCCACAAAGGATGTCCTTATTGAAGTGGATGAAAATGGCACACTGGACCTGAGTATGAAAAAGAACCGCGATAGAGTAAAAGCCCCACCAATGGTGCCTTTGGGAACAGCACTGCCTACACCCGAGGCTTCTCCTTCAAAGTCTGGCAGCATCAGGGTCACCCCTGCGTTCTACCAGGCGCTGTGTGAGCAGGAGGGGTGGGACACCCCTCTCAACTACAGCAAAGCCCATATAATAAGGGACAACGAGCAAGATGAAGTTGAAAACGAAGTACTAGAGGACAGAAAATATCCAGGCGATGTAACTATTCCAAGTCCCAAGACCAAAGTGTTCTCCAGGGACAATAAGAAAGAGCTCATGAGCTGTCCCACTCCAGGTTGTGATGGAAGTGGCCATGTGACTGGAAACTATGCTTCACACCGAAgtgttTCCGGGTGCCCATTGGCTGACAAGACTCTCAAATCTCTAATGGCTGCCAATTCTCAGGAACTCAAgtgcccaacacctggttGTGATGGGTCAGGTCATGTGACTGGAAACTACGCCTCACACAGAAGATGTCCAGTAATTGGTTGTGATGGCCAAGGTCACATATCGGGCAAATATACATCCCACCGCAGTGCAGGAAGCTGCCCCATTGCTGCCAAGAGACAGAAGGAGAGCTCTATTAATGGGACTCCATTCTCCTGGAAAGTCAGCAAACAGGAATTGCCACACTGTCCTTTGCCAGGCTGTAATGGATTGGGTCAtgctaataatgtatttgtcacTCATAGAAGCTTGTCTGGATGTCCACTGAATGCTCAGTCAATCAAGAAAAAGGTTTCAGGAGAGGAGATGATGACCATTAAACTCAAAGCAAGCAGTGGCATAGAAAATGACGAAGAGATGAAACATCTGGATGAAGAGATAAAGGAACTGAATGAATCAAACCTGAAAATAGAGGCTGACATGATGAAACTCCAGACACAGATATCATCAATGGAATGTAATCTAAAAACaattgaagaagaaaacaagctGATTGAGCAACATAATGACAGCCTGCTGAAGGAGCTGGCACGCCTGAGTCAGGCACTTATCAACAGTCTTACTGACATACAACTCCCTCAGATGgggCCAATCAGTGAACAGAATTTTGAAGCCTATGTGAACACTTTAACAGATATGTATAACAATTCAGAGCATGATTATTCTCCTGAATGTAAAGCTCTTCTTGAAAGCATCAAGCAAGCTGTAAAGGGAATTCAC

Function

GO: NA

KEGG:

id description
K24386 ST18; suppression of tumorigenicity 18 protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019357 True 3002 mRNA 0.48 21 16507638 16552225

Neighbor

gene id symbol gene type direction distance location
AMCG00019355 pcmtd1,LOC107732114,LOC107717289 coding downstream 33293 16454740 ~ 16474345 (-)
AMCG00019356 NA coding downstream 86356 16390377 ~ 16421282 (-)
AMCG00019352 NA coding downstream 518710 15988163 ~ 15988928 (-)
AMCG00019351 snai2 coding downstream 642782 15863787 ~ 15864856 (-)
AMCG00019348 NA coding downstream 826308 15632482 ~ 15681330 (-)
AMCG00019358 NA coding upstream 164140 16716365 ~ 16760441 (-)
AMCG00019359 LOC107677137 coding upstream 239670 16791895 ~ 16843567 (-)
AMCG00019360 NA coding upstream 339513 16891738 ~ 16899067 (-)
AMCG00019366 NA coding upstream 403665 16955890 ~ 16976970 (-)
AMCG00019363 atp6v1h,LOC107686042,LOC107664082 coding upstream 435416 16987641 ~ 17006138 (-)
G33419 NA non-coding downstream 195772 16272067 ~ 16311866 (-)
G33393 NA non-coding downstream 576430 15858177 ~ 15931208 (-)
G33291 NA non-coding downstream 1251615 15254032 ~ 15256023 (-)
G33285 NA non-coding downstream 1323101 15182780 ~ 15184537 (-)
G33282 NA non-coding downstream 1345671 15161712 ~ 15161967 (-)
G33461 NA non-coding upstream 66077 16618302 ~ 16618691 (-)
G33531 NA non-coding upstream 491793 17044018 ~ 17044239 (-)
G33532 rgs19,rgs20,LOC103135694 non-coding upstream 497289 17049514 ~ 17049746 (-)
G33533 NA non-coding upstream 497772 17049997 ~ 17054332 (-)
G33579 NA non-coding upstream 751233 17303458 ~ 17303696 (-)
G33381 ube2v2,LOC107732116 other downstream 786186 15692482 ~ 15721452 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 1515642 14951842 ~ 14991996 (-)
G33163 NA other downstream 1949348 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 2842408 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 3319346 13168436 ~ 13188292 (-)
AMCG00019396 NA other upstream 1832642 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 2742587 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 2890170 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 4191305 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 6118422 22670647 ~ 22744182 (-)

Expression


Co-expression Network