Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019358 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 16716365 ~ 16760441 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04727 | GABAergic synapse |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019358 | True | 279 | mRNA | 0.48 | 2 | 16716365 | 16760441 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019357 | NA | coding | downstream | 164140 | 16507638 ~ 16552225 (-) |
| AMCG00019355 | pcmtd1,LOC107732114,LOC107717289 | coding | downstream | 242020 | 16454740 ~ 16474345 (-) |
| AMCG00019356 | NA | coding | downstream | 295083 | 16390377 ~ 16421282 (-) |
| AMCG00019352 | NA | coding | downstream | 727437 | 15988163 ~ 15988928 (-) |
| AMCG00019351 | snai2 | coding | downstream | 851509 | 15863787 ~ 15864856 (-) |
| AMCG00019359 | LOC107677137 | coding | upstream | 31454 | 16791895 ~ 16843567 (-) |
| AMCG00019360 | NA | coding | upstream | 131297 | 16891738 ~ 16899067 (-) |
| AMCG00019366 | NA | coding | upstream | 195449 | 16955890 ~ 16976970 (-) |
| AMCG00019363 | atp6v1h,LOC107686042,LOC107664082 | coding | upstream | 227200 | 16987641 ~ 17006138 (-) |
| AMCG00019364 | tcea1 | coding | upstream | 295531 | 17055972 ~ 17064681 (-) |
| G33461 | NA | non-coding | downstream | 97674 | 16618302 ~ 16618691 (-) |
| G33419 | NA | non-coding | downstream | 404499 | 16272067 ~ 16311866 (-) |
| G33393 | NA | non-coding | downstream | 785157 | 15858177 ~ 15931208 (-) |
| G33291 | NA | non-coding | downstream | 1460342 | 15254032 ~ 15256023 (-) |
| G33285 | NA | non-coding | downstream | 1531828 | 15182780 ~ 15184537 (-) |
| G33531 | NA | non-coding | upstream | 283577 | 17044018 ~ 17044239 (-) |
| G33532 | rgs19,rgs20,LOC103135694 | non-coding | upstream | 289073 | 17049514 ~ 17049746 (-) |
| G33533 | NA | non-coding | upstream | 289556 | 17049997 ~ 17054332 (-) |
| G33579 | NA | non-coding | upstream | 543017 | 17303458 ~ 17303696 (-) |
| G33584 | NA | non-coding | upstream | 552898 | 17313339 ~ 17315430 (-) |
| G33381 | ube2v2,LOC107732116 | other | downstream | 994913 | 15692482 ~ 15721452 (-) |
| G33259 | garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 | other | downstream | 1724369 | 14951842 ~ 14991996 (-) |
| G33163 | NA | other | downstream | 2158075 | 14491891 ~ 14558290 (-) |
| G33106 | psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 | other | downstream | 3051135 | 13662116 ~ 13665230 (-) |
| AMCG00019312 | NA | other | downstream | 3528073 | 13168436 ~ 13188292 (-) |
| AMCG00019396 | NA | other | upstream | 1624426 | 18384867 ~ 18441981 (-) |
| AMCG00019417 | NA | other | upstream | 2534371 | 19294812 ~ 19301547 (-) |
| AMCG00019419 | cpa6,LOC106579545 | other | upstream | 2681954 | 19442395 ~ 19454969 (-) |
| AMCG00019446 | ube2w | other | upstream | 3983089 | 20743530 ~ 20765496 (-) |
| AMCG00019487 | NA | other | upstream | 5910206 | 22670647 ~ 22744182 (-) |
