AMCG00019360


Basic Information

Item Value
gene id AMCG00019360
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 16891738 ~ 16899067 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019360
atgcccTTACCCCAGCAGCCCGGGCCTGTGCTGATGCCTGTGGGGTATTGTCACCGCTCTGATGTCACTGAGCGCACACTGGCAGTGCGAGCGGCTGCGGAGGGACCGGGCTGCTCACCTGCTGCTGCCTCAAACTCCGCACCAGACACTGTCAGACACTTTCCAACCAAACAAGAGCAAGGCACACTTAAGCAGCGTGGGATAACACCTGGACAGGTAGGTGCCAAAATAGTCAAATCCTCTTTAACAATGGGCACGCCAGTGGAGATTTTCAAGGAGGACAATTGCCTCTCAGTCTTCTCCGAGGAGTGCCTCACAAACTCCACCTGGCTCTCCGGCTATTTTGACATAGATAATGCCACGCACTATTACAACTGGGCAAACCAAACCATGTCGCCTATCATTCCCATCATCACCGCGGTTTATTCCGTGGTTTTTGTGGTGGGCTTGGTGGGCAATTGCCTGGTCATGTATGTTATCATCAGATACACAAAGATGAAGACTGCAaccaacatttacatttttaacctaGCTGTGGCAGATGCTCTTGTGACTACCACAATGCCTTTCCAGAGTACTGATTACTTGCTCAGTTCATGGCCTTTTGGAGAAGTGGTGTGCAAAGTATTTATCTCCATTGATTACTACAACATGTTCACCAGCATTTTCACATTGACCATGATGAGTGTCGACCGGTACATTGCTGTTTGCCATCCTGTCAAAGCCCTCGATTTCCGCACTCCGGTTAAGGCAAAGATAATCAATGTCTGCATCTGGATACTCTCCTCTGCAGCTGGTATACCGGCACTTATACTGGGAAGCACTCAAACTAAGGATGGTGAGTGGCCAATCTGTGTGTTTATCTCTGCCTTCGTTGTGCCCGTCCTCATCATCACGGTGTGCTACACCTTAATGATCCTTCGACTGAAGAGCGTCCGGCTCCTGTCTGGGTCCAGAGAGAAGGACCGCAATCTGCGTCGCATCACAAAACTTGTGCTGGTAGTGGTGgcggtttttattatttgttggaCTCCTATCCATATTTTCATCCTGGTCAAGGCTCTCACACATGTCCCAGAAACCACTGCCTTTATGGCAGCCTACTTTTTCTGTGTGGCGTTGGGCTACACCAATAGTAGCCTGAATCCCATTCTTTATGCATTTCTGGATGAAAACtttaaaaggtgttttaaaGACTTTTGTTTTCACTCAAAGCTGAAAGCAGAGCGTCAGAGTGCCAATAGGGTAAAGAGTACAATACAAAACCCTTCCTGCCCTCAAGAACACCCAGATGGGACAATCAAGCCA

Function

GO: NA

KEGG:

id description
K04214 OPRK1; kappa-type opioid receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019360 True 1308 mRNA 0.48 4 16891738 16899067

Neighbor

gene id symbol gene type direction distance location
AMCG00019359 LOC107677137 coding downstream 48171 16791895 ~ 16843567 (-)
AMCG00019358 NA coding downstream 131297 16716365 ~ 16760441 (-)
AMCG00019357 NA coding downstream 339513 16507638 ~ 16552225 (-)
AMCG00019355 pcmtd1,LOC107732114,LOC107717289 coding downstream 417393 16454740 ~ 16474345 (-)
AMCG00019356 NA coding downstream 470456 16390377 ~ 16421282 (-)
AMCG00019366 NA coding upstream 56823 16955890 ~ 16976970 (-)
AMCG00019363 atp6v1h,LOC107686042,LOC107664082 coding upstream 88574 16987641 ~ 17006138 (-)
AMCG00019364 tcea1 coding upstream 156905 17055972 ~ 17064681 (-)
AMCG00019362 lypla1,lypa1 coding upstream 169571 17068638 ~ 17075185 (-)
AMCG00019372 tmem68,LOC106569251,LOC107577454,LOC104952032 coding upstream 427524 17326591 ~ 17345515 (-)
G33461 NA non-coding downstream 273047 16618302 ~ 16618691 (-)
G33419 NA non-coding downstream 579872 16272067 ~ 16311866 (-)
G33393 NA non-coding downstream 960530 15858177 ~ 15931208 (-)
G33291 NA non-coding downstream 1635715 15254032 ~ 15256023 (-)
G33285 NA non-coding downstream 1707201 15182780 ~ 15184537 (-)
G33531 NA non-coding upstream 144951 17044018 ~ 17044239 (-)
G33532 rgs19,rgs20,LOC103135694 non-coding upstream 150447 17049514 ~ 17049746 (-)
G33533 NA non-coding upstream 150930 17049997 ~ 17054332 (-)
G33579 NA non-coding upstream 404391 17303458 ~ 17303696 (-)
G33584 NA non-coding upstream 414272 17313339 ~ 17315430 (-)
G33381 ube2v2,LOC107732116 other downstream 1170286 15692482 ~ 15721452 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 1899742 14951842 ~ 14991996 (-)
G33163 NA other downstream 2333448 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 3226508 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 3703446 13168436 ~ 13188292 (-)
AMCG00019396 NA other upstream 1485800 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 2395745 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 2543328 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 3844463 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 5771580 22670647 ~ 22744182 (-)

Expression


Co-expression Network