AMCG00019366


Basic Information

Item Value
gene id AMCG00019366
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 16955890 ~ 16976970 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019366
ATGATCCAGTGCAAGGTTCTGAAGCAGCTTGAGAACTTGGAGCAGCAGAAATATGATGATGAGGACATCTCTGATGACATTAAGTTCCTCTTGGAGAAGCTGGGTGAAAGTGTTCAAGACTTGAGGATCTTGACCAGGCTGCTTGAGGTCTCTGATGACCCCCAGGTGATAGCAGTTGCAGCACATGATGTCGGAGAATATGTGAGACACTATCCTAGGGGCAAACGAGTTATTGAGCAGCTGGGTGGAAAGCAGTTAGTGATGAACCACATGCACCACGAGGATCAGCAGGTCCGCTACAATGCCCTGCTGGCTGTGCAAAAGCTCATGGTGCACAACTGGtaa

Function

GO: NA

KEGG:

id description
K02144 ATPeV1H; V-type H+-transporting ATPase subunit H

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019366 True 345 mRNA 0.49 3 16955890 16976970

Neighbor

gene id symbol gene type direction distance location
AMCG00019360 NA coding downstream 56823 16891738 ~ 16899067 (-)
AMCG00019359 LOC107677137 coding downstream 112323 16791895 ~ 16843567 (-)
AMCG00019358 NA coding downstream 195449 16716365 ~ 16760441 (-)
AMCG00019357 NA coding downstream 403665 16507638 ~ 16552225 (-)
AMCG00019355 pcmtd1,LOC107732114,LOC107717289 coding downstream 481545 16454740 ~ 16474345 (-)
AMCG00019363 atp6v1h,LOC107686042,LOC107664082 coding upstream 10671 16987641 ~ 17006138 (-)
AMCG00019364 tcea1 coding upstream 79002 17055972 ~ 17064681 (-)
AMCG00019362 lypla1,lypa1 coding upstream 91668 17068638 ~ 17075185 (-)
AMCG00019372 tmem68,LOC106569251,LOC107577454,LOC104952032 coding upstream 349621 17326591 ~ 17345515 (-)
AMCG00019380 NA coding upstream 437236 17414206 ~ 17421484 (-)
G33461 NA non-coding downstream 337199 16618302 ~ 16618691 (-)
G33419 NA non-coding downstream 644024 16272067 ~ 16311866 (-)
G33393 NA non-coding downstream 1024682 15858177 ~ 15931208 (-)
G33291 NA non-coding downstream 1699867 15254032 ~ 15256023 (-)
G33285 NA non-coding downstream 1771353 15182780 ~ 15184537 (-)
G33531 NA non-coding upstream 67048 17044018 ~ 17044239 (-)
G33532 rgs19,rgs20,LOC103135694 non-coding upstream 72544 17049514 ~ 17049746 (-)
G33533 NA non-coding upstream 73027 17049997 ~ 17054332 (-)
G33579 NA non-coding upstream 326488 17303458 ~ 17303696 (-)
G33584 NA non-coding upstream 336369 17313339 ~ 17315430 (-)
G33381 ube2v2,LOC107732116 other downstream 1234438 15692482 ~ 15721452 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 1963894 14951842 ~ 14991996 (-)
G33163 NA other downstream 2397600 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 3290660 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 3767598 13168436 ~ 13188292 (-)
AMCG00019396 NA other upstream 1407897 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 2317842 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 2465425 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 3766560 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 5693677 22670647 ~ 22744182 (-)

Expression


Co-expression Network