AMCG00019368


Basic Information

Item Value
gene id AMCG00019368
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 17075670 ~ 17078562 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019368
gttttaatgtaattacttAAACAGTAATTCCACACACAACAACTCAAAGCAGGCTTATCTGTTATTCTCTAACAGTTTATTTACATGTCTGCCGTATACTTACAGTGCGTCACTGTCGCACTACATGACGTCAGCCCTGTATTCTTTTCAGTGCCGTAAAGCAGTATTTCAGATTGTATCACGTGGGTATTTCAATTCTGCCCTTGGACttttgtaaagatgtctgtccCAAAGAAACCCGGCGAGAAAGCATTGAATCTTCTTCGAAATTTACCTCGGATCTCCTTAGTGAACCTCAGACCGAATCCGGGAGCAAAGAAGCTAGATAAGAGGCGTGGCAGGGGCGCCCATGGTGGGAACAGAAGTGGTCGGGGTCACaaaggagagaggcagaggggcAATCGTCCTCGTCTGGGGTTTGAGGGCGGTCAGGTGCCCTTTTACCTGGCTATCCCCAAGTATGGATACAACGAGGGCCACAGTCGTAGGCCTCAGTATCAGCCCTTAAGCCTCAACAGACTTCAGTACCTGATCGATCTGGGCCGGGTGGACCCCAGCCAGCCCATTGACCTCACTCAGTTAGTAAATGCCAGAGGAGTGACAgGTGCTGATATATTTGCAGCTAAAGTGAATATTGAAGTTCAGATGGCTTCAGAGGCTGCTATAGCTGCCGTAGAGAAGAACGGTGGTGTTATTACAACAAGTTTCTATGATCCAAGAAGTTTAACTGTCCTCTGTAAACCGGTTCCATTCTTCATGACTGGGCAGCCCATCCCAAAGCGTATGTTTCCAGGAGAGGTCCTGGTTCCCTATTACAGAGACGCCTCAAACCGGGGATACCTGGCAGATCCCGGCCAGATTCAGAAAGCTAGACTTGAACTTGCCAGGAAGTACGGTTATGTTTTACCTGACATTACCAAAGATGAGCTCTTCCAGATGCTCAGTATGCGGAAGGACCCTCGACAGATATTTTTTGGCCTAGCGCCTGGCTGGGTGGTCAATATGGCAGAAAAGAAGATTCTGAAGCCCACTGATGAAAGATTGCTCAGTTATTAtaattcatgaaaaaaaaaaagttttttgtcTTAtgatacaatgtaaaatataaaatgaaattaaaccttTCAAAGCACTGTACACAAAGCTCGATGGTCCGTTCCGTTTTCCTTACACCTTTACTCTTTGTAGGTGGGGAGTATATGATATCAAGCTCTACAGTGTGATGTGTTGTTGTGCAGACTGCTCTGATTGCAAAATGGGACAAACTGattcttattattttcatataaactCTTACATTGTTACAACAGGATTTTAGAAAGGCAAACGTAGTAAATATCGTGTTAGTTGTTTACAGAAATCACTTTTCTTATCATTAATagttatattaaaatgccttttctgTTGATAAATA

Function

GO:

id name namespace
GO:0006412 translation biological_process
GO:0015934 large ribosomal subunit cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02876 RP-L15, MRPL15, rplO; large subunit ribosomal protein L15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019368 True 1414 mRNA 0.43 5 17075670 17078562

Neighbor

gene id symbol gene type direction distance location
AMCG00019361 NA coding upstream 25495 17044096 ~ 17050175 (+)
AMCG00019365 NA coding upstream 219388 16493467 ~ 16856282 (+)
AMCG00019354 sntg1 coding upstream 809571 16240382 ~ 16266099 (+)
AMCG00019353 NA coding upstream 945230 15929875 ~ 16130440 (+)
AMCG00019350 ub2v2,ube2v2 coding upstream 1370590 15693042 ~ 15705080 (+)
AMCG00019367 NA coding downstream 11507 17090069 ~ 17091118 (+)
AMCG00019369 NA coding downstream 40786 17119348 ~ 17120947 (+)
AMCG00019370 NA coding downstream 76308 17154870 ~ 17214411 (+)
AMCG00019374 xkr4,zgc:123035,LOC107679338,LOC107728991,LOC107714844,LOC107674319,LOC107567404 coding downstream 137092 17215654 ~ 17216544 (+)
AMCG00019373 xkr4,LOC106569249 coding downstream 220144 17298706 ~ 17303866 (+)
G33521 NA non-coding upstream 17450 17057586 ~ 17058220 (+)
G33474 NA non-coding upstream 274743 16798149 ~ 16800927 (+)
G33448 NA non-coding upstream 571594 16496841 ~ 16504076 (+)
G33444 NA non-coding upstream 584617 16488871 ~ 16491053 (+)
G33422 NA non-coding upstream 709328 16366114 ~ 16366342 (+)
G33585 NA non-coding downstream 237111 17315673 ~ 17320035 (+)
G33615 NA non-coding downstream 344062 17422624 ~ 17424898 (+)
G33634 NA non-coding downstream 352391 17430953 ~ 17432628 (+)
G33750 NA non-coding downstream 1064934 18143496 ~ 18144704 (+)
G33794 NA non-coding downstream 1306322 18384884 ~ 18389982 (+)
G33406 NA other upstream 993727 16043942 ~ 16081943 (+)
AMCG00019345 NA other upstream 1448715 15554819 ~ 15626955 (+)
G33283 NA other upstream 1905829 15164348 ~ 15169841 (+)
G33159 LOC103376870 other upstream 2588964 14439253 ~ 14486706 (+)
G32539 NA other upstream 6666173 10404639 ~ 10409497 (+)
AMCG00019376 NA other downstream 370758 17449320 ~ 17452659 (+)
AMCG00019402 NA other downstream 1926462 19005024 ~ 19021412 (+)
AMCG00019415 NA other downstream 2206974 19285536 ~ 19294208 (+)
AMCG00019428 LOC107595150 other downstream 2372685 19451247 ~ 19455137 (+)
G34170 rpl7 other downstream 3528912 20607474 ~ 20610889 (+)

Expression


Co-expression Network