Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019369 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 17119348 ~ 17120947 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0070121 | Kupffer's vesicle development | biological_process |
| GO:0035469 | determination of pancreatic left/right asymmetry | biological_process |
| GO:0061371 | determination of heart left/right asymmetry | biological_process |
| id | description |
|---|---|
| K04495 | SOX17; transcription factor SOX17 (SOX group F) |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019369 | True | 1182 | mRNA | 0.59 | 2 | 17119348 | 17120947 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019367 | NA | coding | upstream | 28230 | 17090069 ~ 17091118 (+) |
| AMCG00019368 | NA | coding | upstream | 40786 | 17075670 ~ 17078562 (+) |
| AMCG00019361 | NA | coding | upstream | 69173 | 17044096 ~ 17050175 (+) |
| AMCG00019365 | NA | coding | upstream | 263066 | 16493467 ~ 16856282 (+) |
| AMCG00019354 | sntg1 | coding | upstream | 853249 | 16240382 ~ 16266099 (+) |
| AMCG00019370 | NA | coding | downstream | 33923 | 17154870 ~ 17214411 (+) |
| AMCG00019374 | xkr4,zgc:123035,LOC107679338,LOC107728991,LOC107714844,LOC107674319,LOC107567404 | coding | downstream | 94707 | 17215654 ~ 17216544 (+) |
| AMCG00019373 | xkr4,LOC106569249 | coding | downstream | 177759 | 17298706 ~ 17303866 (+) |
| AMCG00019371 | NA | coding | downstream | 224675 | 17345622 ~ 17370582 (+) |
| AMCG00019375 | lyn,LOC107728263,LOC108432264,LOC103026730 | coding | downstream | 264903 | 17385850 ~ 17415697 (+) |
| G33521 | NA | non-coding | upstream | 61128 | 17057586 ~ 17058220 (+) |
| G33474 | NA | non-coding | upstream | 318421 | 16798149 ~ 16800927 (+) |
| G33448 | NA | non-coding | upstream | 615272 | 16496841 ~ 16504076 (+) |
| G33444 | NA | non-coding | upstream | 628295 | 16488871 ~ 16491053 (+) |
| G33422 | NA | non-coding | upstream | 753006 | 16366114 ~ 16366342 (+) |
| G33585 | NA | non-coding | downstream | 194726 | 17315673 ~ 17320035 (+) |
| G33615 | NA | non-coding | downstream | 301677 | 17422624 ~ 17424898 (+) |
| G33634 | NA | non-coding | downstream | 310006 | 17430953 ~ 17432628 (+) |
| G33750 | NA | non-coding | downstream | 1022549 | 18143496 ~ 18144704 (+) |
| G33794 | NA | non-coding | downstream | 1263937 | 18384884 ~ 18389982 (+) |
| G33406 | NA | other | upstream | 1037405 | 16043942 ~ 16081943 (+) |
| AMCG00019345 | NA | other | upstream | 1492393 | 15554819 ~ 15626955 (+) |
| G33283 | NA | other | upstream | 1949507 | 15164348 ~ 15169841 (+) |
| G33159 | LOC103376870 | other | upstream | 2632642 | 14439253 ~ 14486706 (+) |
| G32539 | NA | other | upstream | 6709851 | 10404639 ~ 10409497 (+) |
| AMCG00019376 | NA | other | downstream | 328373 | 17449320 ~ 17452659 (+) |
| AMCG00019402 | NA | other | downstream | 1884077 | 19005024 ~ 19021412 (+) |
| AMCG00019415 | NA | other | downstream | 2164589 | 19285536 ~ 19294208 (+) |
| AMCG00019428 | LOC107595150 | other | downstream | 2330300 | 19451247 ~ 19455137 (+) |
| G34170 | rpl7 | other | downstream | 3486527 | 20607474 ~ 20610889 (+) |
