AMCG00019377


Basic Information

Item Value
gene id AMCG00019377
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 17481323 ~ 17486099 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019377
CACCCTCACTTGCAATCCAATAAATTCACCTGTACATAGACATCAGCCAGGTTGCAGGCGTGTTGCGTCTTTCAGGTGACAGCTCTCTCCCTATTCTTTATATAACGGGAGCTGTAAGACATAGTGGTATTTTAGTTTAACTGcaggtcatttatttttctagatTTGCTCCAGAGGGGTTGGCTCACTCCTGTATAAATATTTGGTGCAAGGCTTGGTCTGCATCATTGCAGCTTGAAACTTCAGAGGACTTTCCTATCCAGGGAGAAAAGACCCCATGGCGTTAGCTGTAAGATGCCCGTGTTGGCTGCTGGTCCTGAGCGCCTGTCTGATACTCACCGTGAGAGCCGACTGTGGCAAAGACTGTACCCACTGCACATACCATCCACAGGGTCGCCAGGCAGAAATCAACACTCTGacatGTACATTAGAATGTGAAGGGAAGCTGGCTTCTGCAAAATCCTGGGATCTGTGCAAAGAAATATTACAAGGAAAAAAGGGCGATATTTCATCAGAAGAAGATAACATTGCCATTGAAAGTGTCAATCAAGAGAATGATGGCCACCAACTTGCAAAGAAGTATGGTGGCTTTATGAAACGCTATGGTGGCTTCATGAAGAAAACAGCTGAACTCTACAATGTCGAACCAGAGGATGAAAACAATGGTAGAGAGATTCTAGCTAAGAGGTACGGAGGATTTATGAAGAAAGAtgcagagagtggagtagacaCAGTTAACCTTTTAAAGGAGATCCTGAATGCAGGTGGCAGTGACATGGAAAGCCATGGAGACCATGATGGCGAGATCATGAAAAGGTATGGAGGATTTATGAGGAGCATCAAGAGAAGCCTAGACCTTGAAGATGGGATAAAAGAGCTTCAGAAAAGATATGGTGGGTTCATGAGAAGGGTGGGCAGACCTGAATGGAAAGAAGACCAAAAAAGGTATGGTGGATTTCTCAAGCGATCCAGAGATGACACCGCTGAAAGTAACTCTGAAGATATGcaagacatggaaaagagatATGGAGGATTTATGGGATATTAGTTTCCAAATCAAAAGACACTCACATgaatcatattttgttgttctaCTGTCTTGCTTGCGATGTACAGTTTTTTACTGTCTAAGGTAAAGATTTGCAACTGTTTCCTCCTTCTCGTTCAATCTACACTGCAaaccacatttatttaaaatagatatgtttttaatttctgtctGATAAGAACAATGCAGTTTCCATTACATGTAACACCTACTGTGTTGTCCTTGACCTGGcacatgttgtgtttatgttAGCAGACGCTTTTACCGTTCAGTTGTGTTTTCAACTTTACCTCTTTCTTGTCAATATTAGTGAAAATTGTGTACGAAAAGACTGCACAAAAGTCTGAGAAATTCCATTCCGTGGACTGTGTTAGTTTAAATtgtcataaaatacattttctcctgAATAAACTACGTGTTTGCCAGGAGAGGGGTTGCAGTACGTTACTGAAACAGATTTGTTCATATTTCAGTGGTATGTAGTTCTTGAGGcttaaactgtattttgttatatgctctatattttttcatttgaatcaaAGTTGTAACTCCTACTGCTTAGCTGTACAGATTataataaattcattttaactGCAGAACCTAATGTGTTTGTCATCAGTTACCATTCTAGGTGATTCCTTGTAACATACCATGCCTTTCAACACACAATAAACTGAGCTCTCATTATATTGGAAACACCTCCAGTTTTAAAGTATGATTTCATCTTAGTTTATGACTCAAAAACCTGCACAGTACAGTGTTCTGAAATCAGAAGCACATCATGTTCAGTGCAGTTGGCAGTAGAGAAATCTCTGGGA

Function

GO: NA

KEGG:

id description
K18832 PENK; proenkephalin A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019377 True 1866 mRNA 0.40 3 17481323 17486099

Neighbor

gene id symbol gene type direction distance location
AMCG00019379 sdr16c5,LOC106599159,LOC105008851 coding downstream 3566 17459764 ~ 17477757 (-)
AMCG00019381 NA coding downstream 41003 17438188 ~ 17440320 (-)
AMCG00019378 rs20,rps20 coding downstream 56659 17422668 ~ 17424664 (-)
AMCG00019380 NA coding downstream 59839 17414206 ~ 17421484 (-)
AMCG00019372 tmem68,LOC106569251,LOC107577454,LOC104952032 coding downstream 135808 17326591 ~ 17345515 (-)
AMCG00019383 NA coding upstream 127017 17613116 ~ 17621891 (-)
AMCG00019391 NA coding upstream 321356 17807455 ~ 17840411 (-)
AMCG00019390 NA coding upstream 411092 17897191 ~ 17911523 (-)
AMCG00019392 ca8,LOC106599582,LOC107693711,LOC107585586 coding upstream 663388 18149487 ~ 18165134 (-)
AMCG00019399 NA coding upstream 1096751 18582850 ~ 18590919 (-)
G33637 NA non-coding downstream 46732 17430306 ~ 17434591 (-)
G33603 NA non-coding downstream 154865 17325269 ~ 17326458 (-)
G33586 NA non-coding downstream 161178 17315548 ~ 17320145 (-)
G33584 NA non-coding downstream 165893 17313339 ~ 17315430 (-)
G33579 NA non-coding downstream 177627 17303458 ~ 17303696 (-)
G33665 NA non-coding upstream 137861 17623960 ~ 17624226 (-)
G33686 NA non-coding upstream 257063 17743162 ~ 17773325 (-)
G33758 rab2a non-coding upstream 692990 18179089 ~ 18198157 (-)
G33765 NA non-coding upstream 729509 18215608 ~ 18216742 (-)
G33830 NA non-coding upstream 1120042 18606141 ~ 18615254 (-)
G33381 ube2v2,LOC107732116 other downstream 1759871 15692482 ~ 15721452 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 2489327 14951842 ~ 14991996 (-)
G33163 NA other downstream 2923033 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 3816093 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 4293031 13168436 ~ 13188292 (-)
AMCG00019396 NA other upstream 898768 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 1808713 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 1956296 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 3257431 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 5184548 22670647 ~ 22744182 (-)

Expression


Co-expression Network