AMCG00019380


Basic Information

Item Value
gene id AMCG00019380
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 17414206 ~ 17421484 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019380
AGCGGCTCTGACTGCGCAGATGTGCGCTGTGGCTCATTtattcagcagcagcagcagcagtgtgagGACAGCAGAGGACATTGCTACTATAGTACACAAAGGTATTGTTTAATGCGACTCCAGCTGACTTCTGTAAACTGGTAACATTTTATCAATCGATATCCATAACCTGTATGACATAATAAGTGAAAAACAAGCGATGAGATCCTGTTTAAATAAGCGACAACCTAAACCCATTGCCAGCTGATCGCAGTCGTCGTGTGGGGGTGGTAGAGATGTCCACTGATGAGAGCTGCATGCTGGCGGATGTGGACGCCATGGAGTCCACGCCGTGCGAGCTTCATGTGGAGCACCTTCACAAAGGCGCCCTGTCTGAGCTGTCCGCAATATCGGCAACCCCCGCAACCCCCGCCCAGGTTGACCCAGTTGGTAAGACTGAAGAGCAGCAGCTAAAGGTCTACCTAAGAGTGAGACCGTTTTCCAAGGAAGAGATCTCGAATAATGAGGATCAGGGTTGTGTCGTTTTGGAAAGTGCTGAAGTAGCAGTGCTGCAGGCCCCTAAGGAATCCTTAACGATGAAGAACAGCGAGAAGGGGATTGGACAGGCCATGCATAAGTTTTCCTTTTCTCAGATCTTTGGACCTGAAACAACACAGACAAACTTCTTTGAAAGATCTGTTCAAGACCCTGGCATTTTACCCCGAGCTCTTGATTTGATCTTTAATCATATAAAAGGGAAGCAATATGAACAAATGGATCTGAAGCCTTATCTCGGCAGTGATGTCCAGTATCTAGATTCTGAGCAAGTTCAGATGGAGAAATCCACAAAAGCTGCGGTGTTTGCATTACTCAAAGAGGAAAATGACCCATCTCTGAAAGCCGGTGGAAGCGCAACTGCTATGAAAAGCATGTCGAAATCTCCATCTACAGCGAGTTTGTCCTTTTCTTCAGTATCCTATGATCAGTCCGGTCTGTTTGACTCGACTGATTCAGAGCAGGATACTTCAAAGTTCTCGGTGTGGGTCTGCTTCTTTGAAATTTATAACGAATGTGTATATGATTTGCTTGATCTGATTCCTACCTCTAAAGGCAAGAAACGTTTAAAGTGGATTTATGTCCAGAACACTGAAGAAGCTTGTAAAATTTTgaaaattggaaataaaaaccGAAGTGCGGCCTCTACAAAGATGAACCAGTCATCAAGCAGAAGCCACAGCATATTTACCATTAAACTTCTGAGAATTCAAGGCACTGAAGTTCAGAAGATATCCGAACTCTCACTTTGTGACTTGGCGGGCTCTGAGAGATGCAACAAAACCAAGACATTTGGAGAGCGCTTGAAAGAAGCTGGAAACATCAATAATTCACTGCTTATTCtgggaaaatgcatttctgcacTGCGTCAAAACCAGAATGTAAAAACCAAGAACAGTTATGTCCCTTTTCGTGAGAGCAAACTGACCAGGCTGTTTCAGTCTATCTTCTGTGGGAAGGGCAGAGCATGCATGATTGTCAACATAAACCAGTGTGCTTCCACCTATGACGAAACTCTCCACGTGATGAAATTCTCTGCTGTAGCCAAGCAGGTGGTGCAGATAATAACCCCCAAAACCTTGGAAAGTATAGCTCCTAGACTGGTGGGAAGGGATGGAAAACCTCTCGTGAAGAACGGGGTCATTGACAATGAGGCCCTGGAAAGTTACCTGTCGGAGGAAGAATTGcttgatgaagatgatgatgatgaagctGACATGTCAATCTTGCCTCAGgagGAGCTCCTAAATATTATCGAGAGCCTCAAAGAGAAGTTGCTTGTGGAACGTCGTAGAAATCTGGTTCAAGAGATCGAGATTCGTAAAGAGATGGGCGATGCGATGCTGCAGCAGCTCATGGAGAGCGAGGAGACCAGGAGCAGGCAGATTGAAGAATTAAAAGACAGCTATGAGGAGAAGCTGGAGAACACCTTTGACATGTACAAGGATGCCATCAAGGAGCACGCTTATCAATGTGCCCTGGAAAGAGTCGAGGATGAATATGTGCCAGTGGAAGAGTTTCTTGAAGAGCAAAAGCATGTTGAGGAGCTGCAGAAGAAACTTGCAGAAACGGCACATAGGCTAAAAGCTTTCCAGGATCCGTTGGCTCCGCAGACCATGGAGAGCTCCACTCGGTGTTCCCCAGAGACGGACATCGCGGTGCTCAATGAAAACCAAGCCCTTTCCGAGGCCAATTCCTTATCTGAACGGCTCCATGAACAGAAAGACGAGATCATCAAATCCTTGAAGAAAAAGATTGATGAAATGAATGAAACCCTCCAGGAAGCCGGAGAGAGCTTTAGGGAAAAGGAAGCTGAAATCAAGGACTTTCTAGAGCGAATTCTCCAACAGGACCAGGCAATTGAAAGACTCCAGAGCAGCAATTCAGAGCTAGAGATTGTGGTGTCGCAGCTTAGAGAAGACCTTCAACGGCTAAATCAGCTTTCAAAAGAAGTCTCTGAGCAGCCTCGACCCAAGAGAGGCCTGCTTGCCAACATCAAGGCCTCCGTTAGTTCCCCTGTAAAGCTGCCTCTCAGCCGGACTTTGAAGAAGTCTGTCAAAAGCACGCCCAGATCCACCCAGAAGATGGCCTTGTAAAATGAAACTGCCATTTGTCATTTATTGTTGtacaaatcttttatttttttttaatatatatacacattaaagttgatttaaattataaaattgtcTTTTACATGTTAAATTCTGTACACAAAATGCTTTGAGGCCTCCATGAAATCCAGGAGCACTGCTTTGATCCGGTTTAGAAAAGCAATCCGTTTTTGTATTATCTCATGATTAATGGTTCATCGCCACAACCGTACAGTGTATTTTAGAAATGGTTGTTCTTGTTTAGTATCGTTGCATGTATACATTAGGATCATACAGTATGGTATGCTGGAAATGGACATTAGAGGGTGCTATagctaaaacaaatataattaatacaatgttCACTTAAAGGCGAACGCCACCAAAAATCCATCTGGTCTTAGGTTAGTCTATAAGTAGAAACtcattctgtggagtgagtttttcatttccagctcattctatgtaccataAGTCAGAGATTGAAAggtttctggtacatagaatgagctggaaatg

Function

GO:

id name namespace
GO:0043229 intracellular organelle cellular_component
GO:0005488 binding molecular_function

KEGG:

id description
K10402 KIF20; kinesin family member 20

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019380 True 3146 mRNA 0.44 18 17414206 17421484

Neighbor

gene id symbol gene type direction distance location
AMCG00019372 tmem68,LOC106569251,LOC107577454,LOC104952032 coding downstream 68691 17326591 ~ 17345515 (-)
AMCG00019362 lypla1,lypa1 coding downstream 339021 17068638 ~ 17075185 (-)
AMCG00019364 tcea1 coding downstream 349525 17055972 ~ 17064681 (-)
AMCG00019363 atp6v1h,LOC107686042,LOC107664082 coding downstream 408068 16987641 ~ 17006138 (-)
AMCG00019366 NA coding downstream 437236 16955890 ~ 16976970 (-)
AMCG00019378 rs20,rps20 coding upstream 1184 17422668 ~ 17424664 (-)
AMCG00019381 NA coding upstream 16704 17438188 ~ 17440320 (-)
AMCG00019379 sdr16c5,LOC106599159,LOC105008851 coding upstream 38280 17459764 ~ 17477757 (-)
AMCG00019377 NA coding upstream 59839 17481323 ~ 17486099 (-)
AMCG00019383 NA coding upstream 191632 17613116 ~ 17621891 (-)
G33603 NA non-coding downstream 87748 17325269 ~ 17326458 (-)
G33586 NA non-coding downstream 94061 17315548 ~ 17320145 (-)
G33584 NA non-coding downstream 98776 17313339 ~ 17315430 (-)
G33579 NA non-coding downstream 110510 17303458 ~ 17303696 (-)
G33533 NA non-coding downstream 359874 17049997 ~ 17054332 (-)
G33637 NA non-coding upstream 8822 17430306 ~ 17434591 (-)
G33665 NA non-coding upstream 202476 17623960 ~ 17624226 (-)
G33686 NA non-coding upstream 321678 17743162 ~ 17773325 (-)
G33758 rab2a non-coding upstream 757605 18179089 ~ 18198157 (-)
G33765 NA non-coding upstream 794124 18215608 ~ 18216742 (-)
G33381 ube2v2,LOC107732116 other downstream 1692754 15692482 ~ 15721452 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 2422210 14951842 ~ 14991996 (-)
G33163 NA other downstream 2855916 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 3748976 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 4225914 13168436 ~ 13188292 (-)
AMCG00019396 NA other upstream 963383 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 1873328 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 2020911 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 3322046 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 5249163 22670647 ~ 22744182 (-)

Expression


Co-expression Network