AMCG00019383


Basic Information

Item Value
gene id AMCG00019383
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 17613116 ~ 17621891 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019383
CCGTGGACGTGGAATTGTTTGCTGAAAAATGGTTGTGTGCACTCAAATTATGTCTGGCACTAAATAGGAGATGAGTCGTTTTATTTGCCTATGTTATTTCTTAAAGTCTGTATTTTCATGCGCTTACTAAATTGGTTTGATTATAATATATACGAATAACCTACCGATACCACTTGAATTCAGCGAAGCATCGTCATGTAAAGAGCAGTTATGATAAACATAGCTCAAACATATGTATACACAATTTTTAGTACATTACGAaagataaatatgtatttcatagaTGTAGGCGGTAAACCTGTTTTTGCAAATACTGCAACACATTACTAGAAACTATAATTTTGTTGATAGAAAGTTTAGTATTAAtcctacattttatattgagaTCTACATTTCTACGTATATTCGCTCTGCATGCATGTAGTCTTGTTCTTACTGCAGTAGCATAGCCAGGGATTCATGTGCAATGGCTCCGATGGGGATCAGGCTGTCTCCGCTTGGGGTGGCTGTATTTTGTGTGCTGGGGCTGGGGGTGATCTATCACCTGTACTCGGGTGTGATATCCAGCAGGATAGCCGCATTCAGGCAGGGGAAAAGTGTGGACCTGCGGGACTTACTGGCGCTGTCATTGGAGGCTGCAGTCTCAGGGGGCCGAGAGGTAAAACGGATCCGAGAGGATGACACTCTGGATGCCAAGTCCAAGGGATTGACCCGGGAAGGTGTTAACGAAATGCTAACACTGGGGGACTTATACTCACACAGGAAGATGTATCACCTCATTAAAAACGCCTACCCCTTTCTACAGGTCAACTCAGAGGAACACGATGAGGCTGCTGACCAAGAAACTGCTGTGTGGAGCCATAAGATTCCCGATGACATTCAAGCCACGATCACCGAGAGCAGAGAAGTACCAGCCGAGAGTATTACTGTGTGGATAGACCCTCTGGATGCAACAAAGGAGTACACAGaGAACCTTCGCCAGTATGTCACAACAATGGTTTGTGTTGCTGTAGATGGTGTCCCCATAATTGGAGTAATTTACTATCCTTTCACAGATTACACAGTGTGGGCAATGGTAGGTGCTGGCTCCAGTGTGAAAGCTCGAGCTTCATACAATGAGAAGTCGCCCAAAGTCATCGTCTCGCTCTCTCACGCCGGGAAGGTCAAGCCCTTCATTCAGGAAGCTTTTGGGAATGATACGGGAATCATTGCAGCAGGAGGAGCAGGTTATAAAGTTGGTGCTCTATTGGACATGCCTGACAAGTATGAAAAAGCAGACGTCTATATCCACGTCACATACATCAAGAAGTGGGATATTTGTGCAGGCAACGCAATTCTAAAAGCCCTTGGAGGTCACATGACCACTCTGAAAGGAGAAGAAATAGACTATGCGGGTTCTGAAGCCAATGAGGGCGGAGTTCTAGCAAGCGTAAATATGAATCATAAAGCGTTAGTGGAAAAGCTTCCAAACCGAGAGAATGAGATTCACAACTAAATGTTAGCAGAATACGAAGTCTAAAAACATGGACACTTTGGATTTGCTACTGTTCCAGTGCTGAAACTAAAAACAACCCGAGAAGAGGAATGCGATGTTAACATCAGTGTTAATATAATCATCTCAAAACCAGCAACACCAATGTCTTGAAAATTGACGCAATTTTATCAATGAGACATGATTCATGACGGAGAAATCTTGCCAAATGTGTTGCCGTATGGAGGGACTGAGAGTAGCAATTGCGAAGTCCCAAAGAATAGTACTGCTACTTAATTCTCACAACCTGCTTGTTTTAGAGAGCTTTTCTGAACACTTAAAGAAAAaggatgttaaaaaaatgactgGTGCATATTCACAAAGACTGGTAAAATGGATTTCATTTTATGTTACTTTTATATAGCCGTACGTGCTGTACATGGTGGCAGGGTATGTTTCCCATTTTGAACGTAACAATGGTAATAATGGGGTTTTCTTGGTAATTTCAGTTATATCCTGATCCATGTAAAAGGtgcacaaatatttttcttaaccATCCTGTTGAGGCATCTATTATACAGGTATTGAGATTTCAAAACAATGCTCATTAGGTACATTgtatagttatttaatttgataatatTACTGTGATCAGGTtggtatttaaataatgtctttggatttgaaaaaaaacatctcaaacaATAGTGTGACCAAACACTgatagttttcattcagctagACTATAGAAGGTTAAAATATAATactcttatatatttttagatttatcTTAACCGTGGGTGCACAGTTTCATTAAGTTAGGATCATGAATAGGGGAGACccaaatttaatataaataaatgacttaaaacaaactaattgtAGTTCTTTGTTTAGTAGTGTATGACTTCCtttgaggatttatttttcttgtaaatattaACTTCAAATGAAACTGCCAGATTTGGTAGAACTTTAGTATAGTAACTGGGTCTTAAgaaatgtgtgttatttatatacCATCTATACCaatagaataatttaatttttagaaTTGATTTAAGGAGGTTTGcttatgaaatacaaattgaaaacaggTTTAACTTTGCCTTGAATAGTTCTTATGACTAATATTGCTGCAATTGCGCACATTCACTGTGATAGTTTTACATGCTGTATGCATTTCTAAATGGCCTATTTTTGTATGAAcatgtgtggtttgtgtgaGCAGATATAAGTACTTATGTTCTAATAGGTTGTATATACAATGGTGTTTGCCTTCTTTTGtctactttttgtgtgtgttaatttaaaCGGTATGCATGGAATCATGAGTTAATGCTGTAAACTAAGCCTAAGTGATAGATAACTTTCTCCATTAATTGTTTGAATACTTACTGCATGCTTAATGAAGTCAGTCTTACAGTGTGTTAAGTTTTCTTTCTGCAagggttaaaatacatttttagagaTGATGTTTAGGAGGGTTCCATTATTAAATTAAGACTGAAGTtcttaatcaatatttattgtCAACAGATGTGCTTTCAAAATGACAATTCAACCTTACTTTCATTAACTACACCAGTTTTATTTGTGGTGGTGATAGTTTTCTATTGAATTGTGAAGAGCATTGTATcctaaacatgaaaatgaaaataatgtattttttgtttgggggaaaatggtttgaaataaaaatgttcaattcTCTTGCTAGTTATTTCCATTTATGGATATATATTACTAATGCTAATAAAATAGTACACATCTAGTGTataacacagtgcagtgtacagtaaGGAAAGGAATTACAAACTAGTTAAAACATACTATAG

Function

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0006021 inositol biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0046872 metal ion binding molecular_function
GO:0052832 inositol monophosphate 3-phosphatase activity molecular_function
GO:0052833 inositol monophosphate 4-phosphatase activity molecular_function
GO:0008934 inositol monophosphate 1-phosphatase activity molecular_function

KEGG:

id description
K15759 IMPAD1, IMPA3; Golgi-resident PAP phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019383 True 3309 mRNA 0.37 5 17613116 17621891

Neighbor

gene id symbol gene type direction distance location
AMCG00019377 NA coding downstream 127017 17481323 ~ 17486099 (-)
AMCG00019379 sdr16c5,LOC106599159,LOC105008851 coding downstream 135359 17459764 ~ 17477757 (-)
AMCG00019381 NA coding downstream 172796 17438188 ~ 17440320 (-)
AMCG00019378 rs20,rps20 coding downstream 188452 17422668 ~ 17424664 (-)
AMCG00019380 NA coding downstream 191632 17414206 ~ 17421484 (-)
AMCG00019391 NA coding upstream 185564 17807455 ~ 17840411 (-)
AMCG00019390 NA coding upstream 275300 17897191 ~ 17911523 (-)
AMCG00019392 ca8,LOC106599582,LOC107693711,LOC107585586 coding upstream 527596 18149487 ~ 18165134 (-)
AMCG00019399 NA coding upstream 960959 18582850 ~ 18590919 (-)
AMCG00019398 LOC107674130,LOC107714858 coding upstream 973092 18594983 ~ 18605836 (-)
G33637 NA non-coding downstream 178525 17430306 ~ 17434591 (-)
G33603 NA non-coding downstream 286658 17325269 ~ 17326458 (-)
G33586 NA non-coding downstream 292971 17315548 ~ 17320145 (-)
G33584 NA non-coding downstream 297686 17313339 ~ 17315430 (-)
G33579 NA non-coding downstream 309420 17303458 ~ 17303696 (-)
G33665 NA non-coding upstream 2069 17623960 ~ 17624226 (-)
G33686 NA non-coding upstream 121271 17743162 ~ 17773325 (-)
G33758 rab2a non-coding upstream 557198 18179089 ~ 18198157 (-)
G33765 NA non-coding upstream 593717 18215608 ~ 18216742 (-)
G33830 NA non-coding upstream 984250 18606141 ~ 18615254 (-)
G33381 ube2v2,LOC107732116 other downstream 1891664 15692482 ~ 15721452 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 2621120 14951842 ~ 14991996 (-)
G33163 NA other downstream 3054826 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 3947886 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 4424824 13168436 ~ 13188292 (-)
AMCG00019396 NA other upstream 762976 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 1672921 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 1820504 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 3121639 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 5048756 22670647 ~ 22744182 (-)

Expression


Co-expression Network