AMCG00019390


Basic Information

Item Value
gene id AMCG00019390
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 17897191 ~ 17911523 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019390
ATGCAGGACATGGCTAATGCTGACTCACCCCGGTACAACACCCACCCTCAGATGGAAGCTTTGAGACCCCGGGTCCAGTCAGTTATGATGCAGCATGGTCAGCTGACCACGATCAACCAATCACAGCTCAGTGCACAGCTTGGATTGAATATGGGTGGAAATAATGTCCCCCACAGTTCCCCCTCACCTCCTGGAAGCAAATCCGCAACTCCATCTCCCTCCAGCTCAGTCCATGAAGATGAAGCTGATGATACATCAAAGATGAACGGGGCAGAAAAAAGACCAGCTACAGATATGGGAAAGAAGCCGAAAACtccaaagaaaaagaagaagaaagaccCCAATGAGCCACAGAAACCTGTGTCTGCCTACGCACTCTTCTTCCGTGACACTCAAGCTGCAATCAAGGGCCAAAACCCAAATGCCACGTTTGGTGAAGTTTCTAAAATTGTAGCGTCTATGTGGGATGGCTTGGGAGAAGAACAGAAACAgttatacaaaaagaaaacagaagctgCCAAAAAGGAATATCTCAAACAGTTGGCAGCCTACAGGGCAAGCTTGGTTTCTAAGAGTTACAGTGAGCCTATCGATGTGAAAACATCACAAGCTTCCCAAATGATGAACTCAAAGCAGCAAGTTTTCCCCGGAGCAGGGCAGACTCATTCAGGATTGTATATGGGATCTCCTTATCATCAGCAGCCTGGGATGAACCCACATCTGCCTACCATGCATCCAAACCTCCCCAGGAGTATTGCCCCTAAGCCCAACTCGCAGATGCCAGTGACTGTTTCCATATCCAACATGGCAGTGTCTCCACCTCCCCCACTCCAGATAAGCCCACCTCTGCACCAGCATCTCGGCCTCCAACAGCACCAGTCCCTTACAATGCAGCAGCAGCTAGGAAATCAGCAGATACCACTCCATTCCCCATCAATGCAGCAGGGATTTCCTCTTCCATCTGAATTCCAGAATATTATTAATTCCACATCGTCACCTGGCCAGATTGTTTCTCCATCGATGGATTATGTTCGGTCTGGATGTAGAAATCCTCCGCAACAGAGTGTGGACTGGGGCAATGACTACTGCAGTAATGGgAATCTGCAAAGGGATAAAGCTCTGTACCTCACCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019390 True 1134 mRNA 0.49 6 17897191 17911523

Neighbor

gene id symbol gene type direction distance location
AMCG00019391 NA coding downstream 56780 17807455 ~ 17840411 (-)
AMCG00019383 NA coding downstream 275300 17613116 ~ 17621891 (-)
AMCG00019377 NA coding downstream 411092 17481323 ~ 17486099 (-)
AMCG00019379 sdr16c5,LOC106599159,LOC105008851 coding downstream 419434 17459764 ~ 17477757 (-)
AMCG00019381 NA coding downstream 456871 17438188 ~ 17440320 (-)
AMCG00019392 ca8,LOC106599582,LOC107693711,LOC107585586 coding upstream 237964 18149487 ~ 18165134 (-)
AMCG00019399 NA coding upstream 671327 18582850 ~ 18590919 (-)
AMCG00019398 LOC107674130,LOC107714858 coding upstream 683460 18594983 ~ 18605836 (-)
AMCG00019404 NA coding upstream 909640 18821163 ~ 18833805 (-)
AMCG00019403 armc1,LOC108438805,LOC103365692 coding upstream 1077383 18988906 ~ 19004537 (-)
G33686 NA non-coding downstream 123866 17743162 ~ 17773325 (-)
G33665 NA non-coding downstream 272965 17623960 ~ 17624226 (-)
G33637 NA non-coding downstream 462600 17430306 ~ 17434591 (-)
G33603 NA non-coding downstream 570733 17325269 ~ 17326458 (-)
G33586 NA non-coding downstream 577046 17315548 ~ 17320145 (-)
G33758 rab2a non-coding upstream 267566 18179089 ~ 18198157 (-)
G33765 NA non-coding upstream 304085 18215608 ~ 18216742 (-)
G33830 NA non-coding upstream 694618 18606141 ~ 18615254 (-)
G34006 NA non-coding upstream 1555553 19467076 ~ 19480968 (-)
G34148 NA non-coding upstream 2566734 20478257 ~ 20549700 (-)
G33381 ube2v2,LOC107732116 other downstream 2175739 15692482 ~ 15721452 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 2905195 14951842 ~ 14991996 (-)
G33163 NA other downstream 3338901 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 4231961 13662116 ~ 13665230 (-)
AMCG00019312 NA other downstream 4708899 13168436 ~ 13188292 (-)
AMCG00019396 NA other upstream 473344 18384867 ~ 18441981 (-)
AMCG00019417 NA other upstream 1383289 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 1530872 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 2832007 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 4759124 22670647 ~ 22744182 (-)

Expression


Co-expression Network