AMCG00019400 (nkain4,LOC107724178)


Basic Information

Item Value
gene id AMCG00019400
gene name nkain4,LOC107724178
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 18517139 ~ 18525098 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019400
CTGGCAGCGTTAGAGAGGCAGATTTTTGATTTCCTCGGTTACCAATGGGCACCCATTCTTGGAAACTTTCTTCACATAATAGTCGTCATTCTGGGCCTCTTTGGAACCATTCAGTACCGGCCAAAATACATTGTTGTGtACTCCGTTTGGACCGCCCTCTGGGTTGCCTGGAATGTGTTCGTAATCTGCTTCTATTTGGAAGTAGGCGGCCTTTCAAAG

Function

symbol description
nkain4 Predicted to be involved in regulation of sodium ion transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human NKAIN4 (sodium/potassium transporting ATPase interacting 4).

NR:

description
sodium/potassium-transporting ATPase subunit beta-1-interacting protein 4 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019400 True 219 mRNA 0.47 2 18517139 18525098

Neighbor

gene id symbol gene type direction distance location
AMCG00019395 LOC102793628,LOC103377196,LOC107098905 coding upstream 139084 18337551 ~ 18378055 (+)
AMCG00019393 chd7,LOC107585562,LOC107688517,LOC107718105,LOC107589837,LOC106568873 coding upstream 220918 18257809 ~ 18296221 (+)
AMCG00019394 NA coding upstream 277526 18231215 ~ 18239613 (+)
AMCG00019389 rab2a coding upstream 310013 18179249 ~ 18207126 (+)
AMCG00019386 sdcbp coding upstream 712694 17799605 ~ 17804445 (+)
AMCG00019397 LOC107666630,LOC107590209,LOC107586709,LOC107705256,LOC107721902,LOC107663693 coding downstream 82651 18607749 ~ 18661468 (+)
AMCG00019401 bhlhe22 coding downstream 285782 18810880 ~ 18811692 (+)
AMCG00019408 dnajc5b,LOC107656153,LOC107586796,LOC107721861,LOC107663636 coding downstream 556621 19081719 ~ 19089121 (+)
AMCG00019406 trim55b,LOC107586797,LOC107705202,LOC107663638,LOC107656154,LOC107590338,LOC107721936 coding downstream 571638 19096736 ~ 19119509 (+)
AMCG00019411 rrs1,LOC106579528,LOC107590198 coding downstream 664181 19189279 ~ 19190313 (+)
G33810 NA non-coding upstream 65736 18451133 ~ 18451403 (+)
G33809 NA non-coding upstream 66298 18450617 ~ 18450841 (+)
G33800 NA non-coding upstream 78874 18431364 ~ 18438265 (+)
G33796 NA non-coding upstream 117396 18399016 ~ 18399743 (+)
G33795 NA non-coding upstream 121520 18395401 ~ 18395619 (+)
G33812 NA non-coding downstream 51397 18576495 ~ 18583704 (+)
G33874 NA non-coding downstream 401949 18927047 ~ 18927287 (+)
G33913 NA non-coding downstream 682096 19207194 ~ 19209710 (+)
G34084 NA non-coding downstream 1546238 20071336 ~ 20071564 (+)
G34086 NA non-coding downstream 1550080 20075178 ~ 20078454 (+)
AMCG00019376 NA other upstream 1064480 17449320 ~ 17452659 (+)
G33406 NA other upstream 2435196 16043942 ~ 16081943 (+)
AMCG00019345 NA other upstream 2890184 15554819 ~ 15626955 (+)
G33283 NA other upstream 3347298 15164348 ~ 15169841 (+)
G33159 LOC103376870 other upstream 4030433 14439253 ~ 14486706 (+)
AMCG00019402 NA other downstream 479926 19005024 ~ 19021412 (+)
AMCG00019415 NA other downstream 760438 19285536 ~ 19294208 (+)
AMCG00019428 LOC107595150 other downstream 926149 19451247 ~ 19455137 (+)
G34170 rpl7 other downstream 2082376 20607474 ~ 20610889 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 4090525 22615623 ~ 22643226 (+)

Expression


Co-expression Network