AMCG00019412


Basic Information

Item Value
gene id AMCG00019412
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 19118397 ~ 19118897 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019412
ATGAAGCTCAATTTCCTCATTTCTACCGTGGTTCTTCTCGTTGCCTTTCTACCACGCCATGAATGTAGAGCTCTCGACAGCCCGGGCGCTGTCCAACACGCTCCCGACTCCCAGTCCGacctgcagcagcagcccctGCCCGTCCTGGTGCGCCTGGGAGAGGAGTACTTCATCCGGCTGGGCAATGTCAACAAGAACCCCCCACCGTCCACAGCCAACCTCTCTCCTGAAGACTCCTCGACCACCGTCAACAGGGCTCTGCAACTGCAGCTCACACAGCGGCTTTTGCAAGGCAAAGTTGGTAACATCAGTCGGTTTGTGAGCAGCTCCGGTAACCAGATTGAAGACCTGATGGAAAGGGGGAAGCGGTCCGAAGAGCCCCCCATTTCCCTGGACCTGACCTTCCACCTGCTCAGAGAAGTGCTAGAAATGGCTCGGGCGGAGCAGTTAGCCCAGCAAGCACACAGCAACAGGAAAATGATGGAGATCATCGGAAAGTAA

Function

GO:

id name namespace
GO:0032400 melanosome localization biological_process
GO:0035902 response to immobilization stress biological_process
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05256 CRH; corticotropin-releasing hormone

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019412 True 501 mRNA 0.56 1 19118397 19118897

Neighbor

gene id symbol gene type direction distance location
AMCG00019405 pde7a,LOC107656157,LOC107705260 coding downstream 80998 19017355 ~ 19037399 (-)
AMCG00019403 armc1,LOC108438805,LOC103365692 coding downstream 113860 18988906 ~ 19004537 (-)
AMCG00019404 NA coding downstream 284592 18821163 ~ 18833805 (-)
AMCG00019398 LOC107674130,LOC107714858 coding downstream 512561 18594983 ~ 18605836 (-)
AMCG00019399 NA coding downstream 527478 18582850 ~ 18590919 (-)
AMCG00019409 NA coding upstream 99713 19218610 ~ 19229469 (-)
AMCG00019410 vcpip1,LOC106599449 coding upstream 117300 19236197 ~ 19253413 (-)
AMCG00019416 tcf24 coding upstream 187538 19306435 ~ 19307973 (-)
AMCG00019418 NA coding upstream 198806 19317703 ~ 19323473 (-)
AMCG00019421 cops5,csn5 coding upstream 213104 19332001 ~ 19339682 (-)
G33830 NA non-coding downstream 503143 18606141 ~ 18615254 (-)
G33765 NA non-coding downstream 901655 18215608 ~ 18216742 (-)
G33758 rab2a non-coding downstream 920240 18179089 ~ 18198157 (-)
G33686 NA non-coding downstream 1345072 17743162 ~ 17773325 (-)
G33665 NA non-coding downstream 1494171 17623960 ~ 17624226 (-)
G34006 NA non-coding upstream 348179 19467076 ~ 19480968 (-)
G34148 NA non-coding upstream 1359360 20478257 ~ 20549700 (-)
G34277 NA non-coding upstream 2319018 21437915 ~ 21438156 (-)
G34283 LOC102215562 non-coding upstream 2427311 21546208 ~ 21546524 (-)
G34468 LOC103376870 non-coding upstream 3999904 23118801 ~ 23120960 (-)
AMCG00019396 NA other downstream 676416 18384867 ~ 18441981 (-)
G33381 ube2v2,LOC107732116 other downstream 3396945 15692482 ~ 15721452 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 4126401 14951842 ~ 14991996 (-)
G33163 NA other downstream 4560107 14491891 ~ 14558290 (-)
G33106 psma8,LOC100304914,LOC102789190,LOC103029839,LOC107572146,LOC101062730 other downstream 5453167 13662116 ~ 13665230 (-)
AMCG00019417 NA other upstream 175915 19294812 ~ 19301547 (-)
AMCG00019419 cpa6,LOC106579545 other upstream 323498 19442395 ~ 19454969 (-)
AMCG00019446 ube2w other upstream 1624633 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 3551750 22670647 ~ 22744182 (-)
G34470 NA other upstream 4028964 23147861 ~ 23199608 (-)

Expression


Co-expression Network