Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019418 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 19317703 ~ 19323473 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K17579 | PPP1R42, LRRC67; protein phosphatase 1 regulatory subunit 42 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019418 | True | 690 | mRNA | 0.48 | 5 | 19317703 | 19323473 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019416 | tcf24 | coding | downstream | 9730 | 19306435 ~ 19307973 (-) |
| AMCG00019410 | vcpip1,LOC106599449 | coding | downstream | 64290 | 19236197 ~ 19253413 (-) |
| AMCG00019409 | NA | coding | downstream | 88234 | 19218610 ~ 19229469 (-) |
| AMCG00019412 | NA | coding | downstream | 198806 | 19118397 ~ 19118897 (-) |
| AMCG00019405 | pde7a,LOC107656157,LOC107705260 | coding | downstream | 280304 | 19017355 ~ 19037399 (-) |
| AMCG00019421 | cops5,csn5 | coding | upstream | 8528 | 19332001 ~ 19339682 (-) |
| AMCG00019420 | arfgef1,LOC107584936,LOC107727224,LOC107595140,LOC107758297 | coding | upstream | 44499 | 19367972 ~ 19400055 (-) |
| AMCG00019429 | slco5a1,LOC102798443 | coding | upstream | 558256 | 19881729 ~ 19895839 (-) |
| AMCG00019430 | slco5a1,LOC107695420,LOC107758302,LOC107741005 | coding | upstream | 590546 | 19914019 ~ 19918646 (-) |
| AMCG00019431 | prdm14 | coding | upstream | 638549 | 19962022 ~ 19969808 (-) |
| G33830 | NA | non-coding | downstream | 702449 | 18606141 ~ 18615254 (-) |
| G33765 | NA | non-coding | downstream | 1100961 | 18215608 ~ 18216742 (-) |
| G33758 | rab2a | non-coding | downstream | 1119546 | 18179089 ~ 18198157 (-) |
| G33686 | NA | non-coding | downstream | 1544378 | 17743162 ~ 17773325 (-) |
| G33665 | NA | non-coding | downstream | 1693477 | 17623960 ~ 17624226 (-) |
| G34006 | NA | non-coding | upstream | 143603 | 19467076 ~ 19480968 (-) |
| G34148 | NA | non-coding | upstream | 1154784 | 20478257 ~ 20549700 (-) |
| G34277 | NA | non-coding | upstream | 2114442 | 21437915 ~ 21438156 (-) |
| G34283 | LOC102215562 | non-coding | upstream | 2222735 | 21546208 ~ 21546524 (-) |
| G34468 | LOC103376870 | non-coding | upstream | 3795328 | 23118801 ~ 23120960 (-) |
| AMCG00019417 | NA | other | downstream | 16156 | 19294812 ~ 19301547 (-) |
| AMCG00019396 | NA | other | downstream | 875722 | 18384867 ~ 18441981 (-) |
| G33381 | ube2v2,LOC107732116 | other | downstream | 3596251 | 15692482 ~ 15721452 (-) |
| G33259 | garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 | other | downstream | 4325707 | 14951842 ~ 14991996 (-) |
| G33163 | NA | other | downstream | 4759413 | 14491891 ~ 14558290 (-) |
| AMCG00019419 | cpa6,LOC106579545 | other | upstream | 118922 | 19442395 ~ 19454969 (-) |
| AMCG00019446 | ube2w | other | upstream | 1420057 | 20743530 ~ 20765496 (-) |
| AMCG00019487 | NA | other | upstream | 3347174 | 22670647 ~ 22744182 (-) |
| G34470 | NA | other | upstream | 3824388 | 23147861 ~ 23199608 (-) |
| AMCG00019500 | pign | other | upstream | 4728538 | 24052011 ~ 24094664 (-) |
