AMCG00019426


Basic Information

Item Value
gene id AMCG00019426
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 19726585 ~ 19736870 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019426
CGTCAACCAGTCTGGGACTCAGATCTAATGTCTGCCAGAGGCGGGGGCTCCCTCAGCCAGAAACAAACGAAGGAGTCCTTCTTCTCAAAGGAACTGCAGTGTATGGAGAAACATCTCGCTGaagtggaaaaggacctgGCCAAGATGGCTGAAGGTAAATTATTGAGGAGTCCCAACAGTCCACACAGCAGTCTTCTCCTGTCACCAGCGCTTCAAGGCAGTCTTCAGCCTTTGTCAGGTCCAACTTCTAGACCTCAATCACCAGGAAGCCTTGCTGGTAAAAGCAGCCCACTGCCTCTATATGGAAGCAAACCAGCCTCCCTTGTAACAAGTAGATCACAGACACCAAGCAACCAAAACAGTAGGCCTCAAACTCCCAACGCACAGAGCAGCAGGCCCAGAACGCCTTCAGCTCAAGGAAATAGGCCTGTGACCCCTAACAGTTTGATGCCACGACCTGTCACTCCTGGCACACACAGCAACAAGGATGACAGCTTTGGAAGTCAGAGGAGCAGACCGGTCACACCTACAAGTCAGGCTGGACGGCCTCTACTTACTCCAACTGGGCTGACTACGGGGCCAATCGCTGCTGAGAGTATGGGAAAACCTTCGAGTCAAAGGACCAACCTGTCAGAGGACGAGTTCTATCAGCAGCTCCAGGCTGTCCGACAGCCTTGGCTTATTCCCAGTGACACAGACAGCGACTGTGTGGATCAGGCTGATCAAGACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019426 True 732 mRNA 0.53 3 19726585 19736870

Neighbor

gene id symbol gene type direction distance location
AMCG00019422 zgc:162928,c23h8orf34,LOC105890107,LOC107686688,LOC107758299,LOC107585009,LOC107695418 coding upstream 37971 19680768 ~ 19688614 (+)
AMCG00019424 cunh8orf34,zgc:162928,LOC105890107,LOC107741009,LOC107686688,LOC107566197,LOC107758299 coding upstream 61449 19662374 ~ 19665136 (+)
AMCG00019423 prex2,LOC107566194,LOC107741010,LOC107686687,LOC107758281 coding upstream 100781 19614916 ~ 19625804 (+)
AMCG00019427 prex2,LOC107686687 coding upstream 124945 19536834 ~ 19601640 (+)
AMCG00019414 NA coding upstream 360057 19340246 ~ 19366528 (+)
AMCG00019425 NA coding downstream 110287 19847157 ~ 19877863 (+)
AMCG00019433 NA coding downstream 378454 20115324 ~ 20122534 (+)
AMCG00019445 kcnb2,LOC108426548,LOC107657825,LOC107560266 coding downstream 726453 20463323 ~ 20463886 (+)
AMCG00019444 NA coding downstream 806717 20543587 ~ 20545758 (+)
AMCG00019440 NA coding downstream 818837 20555707 ~ 20565280 (+)
G33913 NA non-coding upstream 516875 19207194 ~ 19209710 (+)
G33874 NA non-coding upstream 799298 18927047 ~ 18927287 (+)
G33812 NA non-coding upstream 1142881 18576495 ~ 18583704 (+)
G33810 NA non-coding upstream 1275182 18451133 ~ 18451403 (+)
G33809 NA non-coding upstream 1275744 18450617 ~ 18450841 (+)
G34084 NA non-coding downstream 334466 20071336 ~ 20071564 (+)
G34086 NA non-coding downstream 338308 20075178 ~ 20078454 (+)
G34093 NA non-coding downstream 358448 20095318 ~ 20096450 (+)
G34183 NA non-coding downstream 896207 20633077 ~ 20635272 (+)
G34192 NA non-coding downstream 936117 20672987 ~ 20746971 (+)
AMCG00019428 LOC107595150 other upstream 271448 19451247 ~ 19455137 (+)
AMCG00019415 NA other upstream 432377 19285536 ~ 19294208 (+)
AMCG00019402 NA other upstream 705173 19005024 ~ 19021412 (+)
AMCG00019376 NA other upstream 2273926 17449320 ~ 17452659 (+)
G33406 NA other upstream 3644642 16043942 ~ 16081943 (+)
G34170 rpl7 other downstream 870604 20607474 ~ 20610889 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 2878753 22615623 ~ 22643226 (+)
AMCG00019481 NA other downstream 3448946 23185816 ~ 23204250 (+)
AMCG00019480 NA other downstream 3496400 23233270 ~ 23248099 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other downstream 3935255 23672125 ~ 23695801 (+)

Expression


Co-expression Network