AMCG00019438


Basic Information

Item Value
gene id AMCG00019438
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 20097386 ~ 20193004 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019438
atgttttacagccCTGTCTGTACTCCACCTCTGCAAGGGTTCACACCTGTGAAGAAATCAGAGCTACCGACGCTTCATAACTTTGTGAGACTTAAATCGCACAGCGCCTTGGCAATCTCTGGCTACCGCTCTCCCacagaggagtgggacaaagaCAGTGGACTACATTTGCTGGTGGAGAAGATCgcTTCAAAAGAGTGCACCAACAATGGACTTGTGACTTCAGGGTATACAAAGactTTTTCCTTTGCTGTGGTAGCAAAGATGCTTCTGGAGAGAATCACGTGTGGAAAGagGGCGCTGATAAAATACTGCACTGTCCTGGGGGCATTCCACCAAGATGAAATGattaaTCTCAATACCAtgGCCTGCTGGAGGAAGCTGCTGAAGGCCAGGTTTGACTGTGGGAAGACAGTGGACCTGGAGACAAAGGGGGACCTCGACGTCGTGGCTTATGTGCAGAATCTGCTCCTCAGGGATCTCCCCAAGGCACTGATTCCAGACCACTCGGGCCTTGTCAACGCCTTCAAAGGAAGTACAGACGAGGCGGAGCTGAGCAGCTACCTCCAGGCTGAGCTGGACAGTCTGCCAGCAGAGCACCTGCGTCTGCTCACACGCCTCGTCTACTTCCTGGCCCGAGCGGCATCTTGTAGCAAGACCAGCAAGATGACGGAGCAGAACTTGGGGACAGTCTTCAGACCCTGCATGTTCCACTCTCTGcctggagggggtggggggcacacCATCAGGGCCCTGGACCCCAGAGCTGAGTCTCTGTCCTACAGAGAGTTTGGGTTCCTCTTTGCTCTGTGCCTGACGATCGCCCACTGTGGCTCTGATTTAATTGGACACTCTAATGCGCCCGTCTTGTCGAACACGCCCTTGAGCACCATGGCGGCCCTGAGCATGAGCACCAGCTTCCTCCAGCGGCATTTCTACGCCATTTCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019438 True 951 mRNA 0.54 10 20097386 20193004

Neighbor

gene id symbol gene type direction distance location
AMCG00019437 tram1,LOC107657822 coding downstream 932 20071779 ~ 20096454 (-)
AMCG00019432 NA coding downstream 81419 19973300 ~ 20015967 (-)
AMCG00019431 prdm14 coding downstream 127578 19962022 ~ 19969808 (-)
AMCG00019430 slco5a1,LOC107695420,LOC107758302,LOC107741005 coding downstream 178740 19914019 ~ 19918646 (-)
AMCG00019429 slco5a1,LOC102798443 coding downstream 201547 19881729 ~ 19895839 (-)
AMCG00019435 eya1,LOC107758809,LOC107657823 coding upstream 247 20193251 ~ 20197134 (-)
AMCG00019436 eya1 coding upstream 14813 20207817 ~ 20278351 (-)
AMCG00019434 NA coding upstream 159150 20352154 ~ 20353094 (-)
AMCG00019439 NA coding upstream 184814 20377818 ~ 20407592 (-)
AMCG00019442 NA coding upstream 371042 20564046 ~ 20574616 (-)
G34006 NA non-coding downstream 616418 19467076 ~ 19480968 (-)
G33830 NA non-coding downstream 1482132 18606141 ~ 18615254 (-)
G33765 NA non-coding downstream 1880644 18215608 ~ 18216742 (-)
G33758 rab2a non-coding downstream 1899229 18179089 ~ 18198157 (-)
G33686 NA non-coding downstream 2324061 17743162 ~ 17773325 (-)
G34148 NA non-coding upstream 285253 20478257 ~ 20549700 (-)
G34277 NA non-coding upstream 1244911 21437915 ~ 21438156 (-)
G34283 LOC102215562 non-coding upstream 1353204 21546208 ~ 21546524 (-)
G34468 LOC103376870 non-coding upstream 2925797 23118801 ~ 23120960 (-)
G34476 NA non-coding upstream 3017237 23210241 ~ 23286999 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 642417 19442395 ~ 19454969 (-)
AMCG00019417 NA other downstream 795839 19294812 ~ 19301547 (-)
AMCG00019396 NA other downstream 1655405 18384867 ~ 18441981 (-)
G33381 ube2v2,LOC107732116 other downstream 4375934 15692482 ~ 15721452 (-)
G33259 garem1,LOC107659447,LOC107598699,LOC107684519,LOC107724394 other downstream 5105390 14951842 ~ 14991996 (-)
AMCG00019446 ube2w other upstream 550526 20743530 ~ 20765496 (-)
AMCG00019487 NA other upstream 2477643 22670647 ~ 22744182 (-)
G34470 NA other upstream 2954857 23147861 ~ 23199608 (-)
AMCG00019500 pign other upstream 3859007 24052011 ~ 24094664 (-)
G35067 NA other upstream 9324992 29517996 ~ 29521984 (-)

Expression


Co-expression Network