AMCG00019450


Basic Information

Item Value
gene id AMCG00019450
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 20777256 ~ 20778916 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019450
TGGCAATGTACTCATATATAGCAGTGCACACAGTGCTTTGTGTCCCCGGCGGATACAGTGTGACGCACACGCTGCGTGGAGCCAACGCGCCCTCCTATTGGCTGCCTGCTCCACTTCCGGGAGCTCTGGTCAGGCGCTGTATAACCTTTAGCGGAGTTCATATTGGGTTGCACAGGTTTCTATACAGCTGCCAGATTCACAACATGTTACGTTTTGTTTGGGAAGCCACACTGGGTCTGTATCGATTTCCAGGACTTCGGCAAGTGGTCGCCAAAGCTGCTCACCAGAGAGCGCAGTTACTGGCCCGGTGCTCCGCCGCGCAGACGCAGTTGTGCGGGTCTGGGGGTTTGCACAGAGCGGCAGGAAGAGCGTTTTCCACTAATAATCACATTGATAAGGTGCCGTTTTCGTACCAGAATTCACAGACCTATTCCAGCTCATCCAGTGCAGGACCGCCTGTTGAAGGGGAACTTATTTATACTGGAAACCTGTCAAATGCTGTGTTTGGGGTGAAATTGTTTTCCTATGGCAGCAGCCTATTCAACCTGTGTGTGGTGCCCGCCATCTGTCTCAAAACAGGCTTTGAGTTTGGGAATGTTGCCTTACAATTGGCAGGATTCAGTGTCCTTTGTGTCTTCACCTTCATAACACCTGTGCTGCTGCACCTCTTCAGCAAACGTTACGTGGTACGTTTGTATCACAACGCAGACACGGACACCTACACGGCTGTGACATACAATGTGCTTCTGTTGGAGAAAAAGACTGTGTTCCATCAGAAGGATGTGAAGATTCCTGACGTGAGCAAGATGTTCACAACCTTTTATGCCAACAGAAAAGCAATGATTGTTAATCCCATGCTTTTCACAGTGCAGAATGACTATCATCACCTAATGGGCTATGACCAACCATATTCATTTGACATGGAAGATAACTAACCTGCATAAAAGCAAAGAGAGTTTGAAAGATAATTCATATTTATCAGGGGAATCAATTTAAAGTATTTCTCTAACCttaagtaaaaatacatttgttaaatagACTTCTGATATTGCAATACTGATATTGCAATACTCATTATTCTCACATTGTACATTTGTTGTGATATTCGATACAAGAATAAACATGTTTCAGTTTGGTTCTTATTTGTTGTCTacttactttaaattaaaatccaaactatattatttta

Function

GO: NA

KEGG:

id description
K17966 TMEM70; transmembrane protein 70, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019450 True 1189 mRNA 0.44 3 20777256 20778916

Neighbor

gene id symbol gene type direction distance location
AMCG00019441 rdh10,rdh10a coding upstream 151219 20612346 ~ 20626037 (+)
AMCG00019440 NA coding upstream 211976 20555707 ~ 20565280 (+)
AMCG00019444 NA coding upstream 231498 20543587 ~ 20545758 (+)
AMCG00019445 kcnb2,LOC108426548,LOC107657825,LOC107560266 coding upstream 313370 20463323 ~ 20463886 (+)
AMCG00019433 NA coding upstream 654722 20115324 ~ 20122534 (+)
AMCG00019453 gdap1 coding downstream 95514 20874430 ~ 20878814 (+)
AMCG00019455 LOC107092069 coding downstream 173503 20952419 ~ 20955046 (+)
AMCG00019454 NA coding downstream 199017 20977933 ~ 20989120 (+)
AMCG00019459 dok6,LOC107741641 coding downstream 421947 21200863 ~ 21209681 (+)
AMCG00019460 NA coding downstream 552346 21331262 ~ 21331771 (+)
G34204 NA non-coding upstream 640 20771526 ~ 20776616 (+)
G34192 NA non-coding upstream 30285 20672987 ~ 20746971 (+)
G34183 NA non-coding upstream 141984 20633077 ~ 20635272 (+)
G34093 NA non-coding upstream 680806 20095318 ~ 20096450 (+)
G34086 NA non-coding upstream 698802 20075178 ~ 20078454 (+)
G34235 NA non-coding downstream 311228 21090144 ~ 21090416 (+)
G34278 NA non-coding downstream 682766 21461682 ~ 21461891 (+)
G34378 NA non-coding downstream 1797058 22575974 ~ 22577472 (+)
G34432 LOC107584984,LOC108256437,LOC107701635 non-coding downstream 2001315 22780231 ~ 22783116 (+)
G34433 NA non-coding downstream 2010092 22789008 ~ 22789463 (+)
G34170 rpl7 other upstream 166367 20607474 ~ 20610889 (+)
AMCG00019428 LOC107595150 other upstream 1322119 19451247 ~ 19455137 (+)
AMCG00019415 NA other upstream 1483048 19285536 ~ 19294208 (+)
AMCG00019402 NA other upstream 1755844 19005024 ~ 19021412 (+)
AMCG00019376 NA other upstream 3324597 17449320 ~ 17452659 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 1836707 22615623 ~ 22643226 (+)
AMCG00019481 NA other downstream 2406900 23185816 ~ 23204250 (+)
AMCG00019480 NA other downstream 2454354 23233270 ~ 23248099 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other downstream 2893209 23672125 ~ 23695801 (+)
AMCG00019492 NA other downstream 3266773 24045689 ~ 24086481 (+)

Expression


Co-expression Network