AMCG00019452


Basic Information

Item Value
gene id AMCG00019452
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 20820716 ~ 20823757 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019452
ATGAAGCGAAAGCAGCAACCGCAGAACAACAGCAGCATCGCAGTGAAGCTGAGCAAGGAAGAGAAAGTCCCCTCAGCCAGCAACTTGGCAGCCAGCGGCAAGTCAGCATCTCGGACCTCGGTGAAACAGGAAGTGCCCCCCCCTAAGCCCATCAAGAAACCAGAGCCAGCACACAATCCCACCAGCTCTGGGAACGGACAGCTTCACTCCCAGTATCACGGGTATTATGTGAAAGCCGAGGTGCAGATCCCGCCCGAAGAGCCCGAGGACACTGACTACAACATCTCCAATTTGGCCCTCGCCAGGATGCCGCCCCCTCCAAAGCAGAGCCGAGTGGCCCTTGCAAAAGCCGTAAAGGGAAAGCCAGCTGCCAAAGAAAGTAAAACCGAGCCAAAAGTGAAGAGACACGAGTCTATAAAACCAAAGAGCCTAGCAGAAACCAAGAAAGCCAGCCTCCAAGAGGACACCAGCGAAGGCACAGAGAATGAATCGGGTCCTAACTCAATTCTGGTTGCCCTTGTAATGCTGTTGAATATTGGTCTAGCAATTCTTTTCGTCCATTTCCTGACTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019452 True 573 mRNA 0.53 2 20820716 20823757

Neighbor

gene id symbol gene type direction distance location
AMCG00019448 TCEB1,tceb1,tceb1b,LOC108426597 coding downstream 44118 20771530 ~ 20776598 (-)
AMCG00019447 stau2,LOC102777375 coding downstream 89735 20728040 ~ 20730981 (-)
AMCG00019449 stau2,LOC107754214,LOC107560262,LOC107691439 coding downstream 116888 20683262 ~ 20703828 (-)
AMCG00019443 NA coding downstream 221223 20594770 ~ 20599493 (-)
AMCG00019442 NA coding downstream 246100 20564046 ~ 20574616 (-)
AMCG00019451 jph1 coding upstream 38375 20862132 ~ 20869165 (-)
AMCG00019456 NA coding upstream 411011 21234768 ~ 21242674 (-)
AMCG00019457 NA coding upstream 423031 21246788 ~ 21293737 (-)
AMCG00019458 NA coding upstream 583704 21407461 ~ 21408830 (-)
AMCG00019462 NA coding upstream 834508 21658265 ~ 21658930 (-)
G34148 NA non-coding downstream 271016 20478257 ~ 20549700 (-)
G34006 NA non-coding downstream 1339748 19467076 ~ 19480968 (-)
G33830 NA non-coding downstream 2205462 18606141 ~ 18615254 (-)
G33765 NA non-coding downstream 2603974 18215608 ~ 18216742 (-)
G33758 rab2a non-coding downstream 2622559 18179089 ~ 18198157 (-)
G34277 NA non-coding upstream 614158 21437915 ~ 21438156 (-)
G34283 LOC102215562 non-coding upstream 722451 21546208 ~ 21546524 (-)
G34468 LOC103376870 non-coding upstream 2295044 23118801 ~ 23120960 (-)
G34476 NA non-coding upstream 2386484 23210241 ~ 23286999 (-)
G34502 NA non-coding upstream 2752770 23576527 ~ 23578285 (-)
AMCG00019446 ube2w other downstream 55220 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 1365747 19442395 ~ 19454969 (-)
AMCG00019417 NA other downstream 1519169 19294812 ~ 19301547 (-)
AMCG00019396 NA other downstream 2378735 18384867 ~ 18441981 (-)
G33381 ube2v2,LOC107732116 other downstream 5099264 15692482 ~ 15721452 (-)
AMCG00019487 NA other upstream 1846890 22670647 ~ 22744182 (-)
G34470 NA other upstream 2324104 23147861 ~ 23199608 (-)
AMCG00019500 pign other upstream 3228254 24052011 ~ 24094664 (-)
G35067 NA other upstream 8694239 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 8711987 29535744 ~ 29550162 (-)

Expression


Co-expression Network