AMCG00019456


Basic Information

Item Value
gene id AMCG00019456
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 21234768 ~ 21242674 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019456
AAACCATCCTAAAAAGACCTGTTGATTCAACTGTGAAACTGCAGAAGGATATGACCCTGAAATGTGTGTGTCCCTGGAGGGGTAACCTCAGTATGGTATCCTGGGAAAAGAGAACAAACAAGGGGAAAGAACAGGTAGCAGTGTACCACACAACATTCGGCACCACAACAAAGGGAAGATTTAACGGAAGAGTTACATTTGTTAATTCATTGCCGTTAGATGGAAGCATTATAATCAATCAAACCACAGATGATGATCTTGGCTTTTATCACTGTTCCATACAAACATTTCCAGGGGGATCATGGAGTAAAAACATACTTGTGGAAAATGCAGgcaaCTTTATTACTACTAAATCTGAAACTGAGGCTGTAGTTGAAAAAGGTCATAATTTCACTCTTAATTGCCGCTATAACCAGAATGGTACAGTTTACCATGTGGCTTTTGAAAAGATTGGAGAGAAATCTAAAGACACCATAGTCTTCTGCAATTTTTCAGATGCTATCTACATTGGTTCAGATTACAAGAACAGGATTCTGTTCGACTGCAGCAGTGCATTACACGCCAGCATACTGATCACGAATATAACGGAAGAAGATGGTGGGATTTACCAATGTCACTTCAGTACTGAGACGGGAAATCAAACAACAACAGTCTCTTTGAATGGGCCTAAATGGGGAATGAATGAGAagatGCGGAAAAAGAAACTAATGAGAGTCAAATTCCAACCTGGAAAAAGACGgCAACACAACAAGTATGAACCGGCAGCTGTTtatgacaaaatgaaaagaaggcCCAAGCAGCAGGAAATGGATGATATCTACATAAATCTTCCAAATCAACCACGTCGAACAAAGAAGAAG

Function

GO: NA

KEGG:

id description
K06567 CD226, DNAM1; CD226 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019456 True 860 mRNA 0.40 5 21234768 21242674

Neighbor

gene id symbol gene type direction distance location
AMCG00019451 jph1 coding downstream 365603 20862132 ~ 20869165 (-)
AMCG00019452 NA coding downstream 411011 20820716 ~ 20823757 (-)
AMCG00019448 TCEB1,tceb1,tceb1b,LOC108426597 coding downstream 458170 20771530 ~ 20776598 (-)
AMCG00019447 stau2,LOC102777375 coding downstream 503787 20728040 ~ 20730981 (-)
AMCG00019449 stau2,LOC107754214,LOC107560262,LOC107691439 coding downstream 530940 20683262 ~ 20703828 (-)
AMCG00019457 NA coding upstream 4114 21246788 ~ 21293737 (-)
AMCG00019458 NA coding upstream 164787 21407461 ~ 21408830 (-)
AMCG00019462 NA coding upstream 415591 21658265 ~ 21658930 (-)
AMCG00019461 cbln2b,LOC107662558,LOC107727212,LOC107589986,LOC107657802,LOC107596058,LOC107741967 coding upstream 627341 21870015 ~ 21872862 (-)
AMCG00019474 NA coding upstream 962313 22204987 ~ 22216671 (-)
G34148 NA non-coding downstream 685068 20478257 ~ 20549700 (-)
G34006 NA non-coding downstream 1753800 19467076 ~ 19480968 (-)
G33830 NA non-coding downstream 2619514 18606141 ~ 18615254 (-)
G33765 NA non-coding downstream 3018026 18215608 ~ 18216742 (-)
G33758 rab2a non-coding downstream 3036611 18179089 ~ 18198157 (-)
G34277 NA non-coding upstream 195241 21437915 ~ 21438156 (-)
G34283 LOC102215562 non-coding upstream 303534 21546208 ~ 21546524 (-)
G34468 LOC103376870 non-coding upstream 1876127 23118801 ~ 23120960 (-)
G34476 NA non-coding upstream 1967567 23210241 ~ 23286999 (-)
G34502 NA non-coding upstream 2333853 23576527 ~ 23578285 (-)
AMCG00019446 ube2w other downstream 469272 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 1779799 19442395 ~ 19454969 (-)
AMCG00019417 NA other downstream 1933221 19294812 ~ 19301547 (-)
AMCG00019396 NA other downstream 2792787 18384867 ~ 18441981 (-)
G33381 ube2v2,LOC107732116 other downstream 5513316 15692482 ~ 15721452 (-)
AMCG00019487 NA other upstream 1427973 22670647 ~ 22744182 (-)
G34470 NA other upstream 1905187 23147861 ~ 23199608 (-)
AMCG00019500 pign other upstream 2809337 24052011 ~ 24094664 (-)
G35067 NA other upstream 8275322 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 8293070 29535744 ~ 29550162 (-)

Expression


Co-expression Network