AMCG00019463


Basic Information

Item Value
gene id AMCG00019463
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 21894877 ~ 21899711 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019463
ATGTGCTGTAATATGGGTGTATTGTTGCAGGGGCAGTGGTCTGTAGCCTTTTTCATGGCAAGTCTTCACTTTCACAAGTTAGTGGAAAGAAGCGCCCTGGGGTCGTCTATATGCCCCTACACAGTGCCGGCGGAGCTGCCTCCCTTTGATGATGTTGATCCAGAGTATGGTCTCCATGGCTACGCTCTGCACATTTCACTTCACAATACTATAAAAGACATCATGTCTGCGCAATTCACTCAGCTGTTCTGCAAAACAgATCAGATTCGCAATGGCTTTGTGATGTTAAAGGTTATCGGCAGAAATGACAAGACACAGCACACACCCATTTCTGGGAAAATTGACACACCCTGGAGGACCGACGCTTTAGGGGGAATTGTCGAGaaCTGTTGCCTGATGAGTTTGACTCTTCTTGATGAGACACAGAATCCATTCTGGTGTGTCAGCACACCAGTGGCAATGCAGCTGTCTGCCAAAGAATCCACATGTTTCGATTATGTGGGGGAGAATTATGTTATCTACTATCAAGATTCAGAGGGAAAGGTTCAAATGAACTTTGTGTGGCTTGAGGAACGGGGACAGTTTTTTCTAATTAATCTTGTTCTTTTCATTGCAACAGAGAAAGTAAATAAGCATTTTGGAAGACAATATTAAGACTGCTCCTTGTCTGGTAAAAGATGGGATTAAAATGCATAGGAATTACTCATTTTGGGATGTATTACAcagaatctgtttttttttttttttttttttttcccccacccaCCAAGTAATACATGTGCAGAAAGTGAAGTGTTTCAGGGGTCAATCAGTAAGCCACATGAGTAATTTAAGTCTGAAAATAGTTATAGCACTTTGTTGCTAAATGGTTATTTGAAAAGTTTGgtataattaatattgtaagGTTTATGATTTACTATAATGTTTCTcatacaataagcaaaaaatgtgttcaggaataaaaatatttttggattGTTCCCAACTAATGTTTGTACAGTCCCTAACTTAGACAAATGGACACATAAAGGTAAAAATAAACCTATGTGTAAATATGGGAGAAGTAGGATTATTAATTTTGAGAATAGATTTGTTATATTAAGGAAGCTGCAAGTTTTTGTAAGTAGAAATATGAAAGCAGAAATAGTTGTTTGGGTCAAATGATATTCCCcagtatacatttgttttgaaaatctGTATGTTCAAGGATATAACCATGAGATGATGCATAGCAATATTCAGAAATTGAGAACTGGATCTGTTGCTTGATGCTGACAGttgacaatgtattttttcttagaTTTTCAGTCTTATTCTGGT

Function

GO: NA

KEGG:

id description
K10298 FBXO15; F-box protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019463 True 1320 mRNA 0.37 4 21894877 21899711

Neighbor

gene id symbol gene type direction distance location
AMCG00019464 NA coding upstream 906 21890063 ~ 21893971 (+)
AMCG00019460 NA coding upstream 563106 21331262 ~ 21331771 (+)
AMCG00019459 dok6,LOC107741641 coding upstream 685196 21200863 ~ 21209681 (+)
AMCG00019454 NA coding upstream 905757 20977933 ~ 20989120 (+)
AMCG00019455 LOC107092069 coding upstream 939831 20952419 ~ 20955046 (+)
AMCG00019472 neto1,neto1l,LOC107727239,LOC107589957,LOC107662554 coding downstream 206450 22106161 ~ 22108328 (+)
AMCG00019471 neto1,neto1l,LOC107727239 coding downstream 273097 22172808 ~ 22184764 (+)
AMCG00019467 LOC107549185,LOC107662560 coding downstream 304954 22204665 ~ 22210456 (+)
AMCG00019468 NA coding downstream 326636 22226347 ~ 22248682 (+)
AMCG00019465 LOC105921547 coding downstream 370798 22270509 ~ 22284359 (+)
G34278 NA non-coding upstream 432986 21461682 ~ 21461891 (+)
G34235 NA non-coding upstream 804461 21090144 ~ 21090416 (+)
G34204 NA non-coding upstream 1118261 20771526 ~ 20776616 (+)
G34192 NA non-coding upstream 1147906 20672987 ~ 20746971 (+)
G34183 NA non-coding upstream 1259605 20633077 ~ 20635272 (+)
G34378 NA non-coding downstream 676263 22575974 ~ 22577472 (+)
G34432 LOC107584984,LOC108256437,LOC107701635 non-coding downstream 880520 22780231 ~ 22783116 (+)
G34433 NA non-coding downstream 889297 22789008 ~ 22789463 (+)
G34435 NA non-coding downstream 899689 22799400 ~ 22799718 (+)
G34436 LOC107686039,LOC107746909 non-coding downstream 918432 22818143 ~ 22818460 (+)
G34170 rpl7 other upstream 1283988 20607474 ~ 20610889 (+)
AMCG00019428 LOC107595150 other upstream 2439740 19451247 ~ 19455137 (+)
AMCG00019415 NA other upstream 2600669 19285536 ~ 19294208 (+)
AMCG00019402 NA other upstream 2873465 19005024 ~ 19021412 (+)
AMCG00019376 NA other upstream 4442218 17449320 ~ 17452659 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 715912 22615623 ~ 22643226 (+)
AMCG00019481 NA other downstream 1286105 23185816 ~ 23204250 (+)
AMCG00019480 NA other downstream 1333559 23233270 ~ 23248099 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other downstream 1772414 23672125 ~ 23695801 (+)
AMCG00019492 NA other downstream 2145978 24045689 ~ 24086481 (+)

Expression


Co-expression Network