AMCG00019464


Basic Information

Item Value
gene id AMCG00019464
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 21890063 ~ 21893971 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019464
ATGGGATGTGTTCGCCTGCCAGACCAGAAGCGACTGGTGCTGTTGGCGGCGCAGCTGCAGACGGGGGTCGTGTGGGGCTCGTGTCGGGGGTCGTGTGACCGCGCGCTCGCTGTGTTTCAGGGTCTCCCCGCTGCACGCGCAGACAGCCACGCTGCCTGCTGCCATGGCGACGGGCCGCGGGCAGTTCTTCCGCAGTTTGAGGAGAGGAGTGGAGCAGGCGCGGAACAGAGCGCCTGCGCAGAACAGAGCGCCTGCGCAGAGAGGAGGGTCTGCGCCCAGCAGCGCCGCATGCGCACAAGCACCCACACCTCCCGCACGAAGCAAATCGCAGAGGTAGCTGATATTACGTCGTCCTGCATTCTAGCTCATGAAAACGACAACTTCAGTCTGATCATTCTGCCACCTGAGATACTGTTGAAGATTTTATCCTACATAGATGCTGCTTCCCTGTTGTGCATCGGATGTGTGAACAAATGGTTTCACAAAATGGCCAAGGACAAtgcattgtggtaCAAGATCTATACGACTGCTTTGGGAAAAAGGAAGTGGAAACCCAAAGTAATAAATGAGACCACAGCAGTACTGAGTGCAGCATCCATAGAAGAAAAGCCCAGTGGATACTGGAGGAGACTGTACTTCAGTAAAATATTAgggaacaatgaaaacaaattgaagcACCAGCTGAAGAACATAAATCCCTATACAGGCCTGCCCAGCAAAACAGAGCAAGTGCTAAGGAACCTTCAGGCCACTTGGGAGATCACAGTATTGGATAAAAAAGGACAAGAGATTACATTTGAACAGTCACATGCATATTTTTCGGAGTCGTCTGTTACGGTGTGTTGGACCAGTACACACTGGCCTTTTCTCAATAATCTGACCTTGCTAAAACTGCATGGAGTGATACGAGTGGCACTTGCTGAAAGTGGGACAATCGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019464 True 942 mRNA 0.52 5 21890063 21893971

Neighbor

gene id symbol gene type direction distance location
AMCG00019460 NA coding upstream 558292 21331262 ~ 21331771 (+)
AMCG00019459 dok6,LOC107741641 coding upstream 680382 21200863 ~ 21209681 (+)
AMCG00019454 NA coding upstream 900943 20977933 ~ 20989120 (+)
AMCG00019455 LOC107092069 coding upstream 935017 20952419 ~ 20955046 (+)
AMCG00019453 gdap1 coding upstream 1011249 20874430 ~ 20878814 (+)
AMCG00019463 NA coding downstream 906 21894877 ~ 21899711 (+)
AMCG00019472 neto1,neto1l,LOC107727239,LOC107589957,LOC107662554 coding downstream 212190 22106161 ~ 22108328 (+)
AMCG00019471 neto1,neto1l,LOC107727239 coding downstream 278837 22172808 ~ 22184764 (+)
AMCG00019467 LOC107549185,LOC107662560 coding downstream 310694 22204665 ~ 22210456 (+)
AMCG00019468 NA coding downstream 332376 22226347 ~ 22248682 (+)
G34278 NA non-coding upstream 428172 21461682 ~ 21461891 (+)
G34235 NA non-coding upstream 799647 21090144 ~ 21090416 (+)
G34204 NA non-coding upstream 1113447 20771526 ~ 20776616 (+)
G34192 NA non-coding upstream 1143092 20672987 ~ 20746971 (+)
G34183 NA non-coding upstream 1254791 20633077 ~ 20635272 (+)
G34378 NA non-coding downstream 682003 22575974 ~ 22577472 (+)
G34432 LOC107584984,LOC108256437,LOC107701635 non-coding downstream 886260 22780231 ~ 22783116 (+)
G34433 NA non-coding downstream 895037 22789008 ~ 22789463 (+)
G34435 NA non-coding downstream 905429 22799400 ~ 22799718 (+)
G34436 LOC107686039,LOC107746909 non-coding downstream 924172 22818143 ~ 22818460 (+)
G34170 rpl7 other upstream 1279174 20607474 ~ 20610889 (+)
AMCG00019428 LOC107595150 other upstream 2434926 19451247 ~ 19455137 (+)
AMCG00019415 NA other upstream 2595855 19285536 ~ 19294208 (+)
AMCG00019402 NA other upstream 2868651 19005024 ~ 19021412 (+)
AMCG00019376 NA other upstream 4437404 17449320 ~ 17452659 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 721652 22615623 ~ 22643226 (+)
AMCG00019481 NA other downstream 1291845 23185816 ~ 23204250 (+)
AMCG00019480 NA other downstream 1339299 23233270 ~ 23248099 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other downstream 1778154 23672125 ~ 23695801 (+)
AMCG00019492 NA other downstream 2151718 24045689 ~ 24086481 (+)

Expression


Co-expression Network