AMCG00019473


Basic Information

Item Value
gene id AMCG00019473
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 22567943 ~ 22580204 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019473
ATGTCTAAAGAGACCCTTTCATTGAGCTGGTATTTGTGTCTGTCGTCTAGTTTCTCGGTCATGCCATGTGAAGTGAAAACTCGTTTCTTGCTGCTCTACGGTTCCCAGAGTGGACAGGCTAAAGCAATTGCTGAAGAAATCTGTCAACAGGCCGATGAGCACGGGTTTAAAGGTGATATTTGCTGTATGAGCGAATCAGCAAAGTATAACCTGGAAACGGAGACGGACCcagttgttattgttgtttcgACTACTGGGGATGGAGAACCTCCAGAAAAAGCTCTTCAGTTTGTAAAGGGCATTAGGACAAAGACTTTACCTCCCGATCACTATGCACATCTGTGCTATGCCCTTCTAGAGCTGGTAGTCGATCCGTGGATTGAGGGACTGTGGGAGGCAATAAGAAAAGCCTATTCAAATATGTCTGATCCAAACCAAGAGCGTAATGACCGTGCCAGGACAGGTCAGAATGGGGAGCCTGCTGAAAGTGCTGATAACAAACAAGTTGCTGACTTGAAAATCCAGCTCCTGAGGATAAATGACTCAAACGATTTGAGTCCAGATCTTCCTGAGCCGAGCCTTGATAAAGGAAAGTCAGGCACTGAGACCACACCCTTGGGGGCCTCTCTGACGACATCCATTTCACCCCTGTCAGAATCCACACTTAATATTCCTGCTCTGCCGCCTCAGTACATACACGTAGAATTAATGAACACGACGACCAAAGAGGAAAATTTTATTCCACCCGATCAAGAAGCTGAACACCAAGTGCCGGTTACCAGAGCCGTACAGCTGTCTCGAGAGGATGCAGTGAAAACCGCCTTGCTGCTTGAACTGGATATTTCAGGAACGCACATCTCTTACCAGCCCGGAGACTCCTTAAATGTTTTCTGCCCCAACAACAGCGGTGAAGTGGAGGAGCTCATTCAGCGGCTGGGCCTGGCAGAGATGAGGGAGCACTCTGCACAGTTACCCTCTTACGTTCCAGAGAAGAGCACGCTGAAGTATCTTCTGACCTGGTGTCTGGAAATAAGAAGTATCCCTAAAAAGGCCTTTCTCCGTGCCTTGGTAGACTACACAACCAATGCTGCCGAGAAGCGACGCTTGCAAGAACTGTGTAGCAAACAGGGCTCCTCGGATTACAACCACTTAGTCCGAGATCCAAACCTCAGtgtgctggagctgctgctcgCTTTCCCGTCTTGTTCACCGCCTCTCAGCCTCCTCATAGAACAACTGCCTAAACTGCGACCAAGATCGTATTCAGCAGCAAGTTCAAGTCTCTATCATCCTGGGAAGCTGCACTTTGTGTTCAATATCGTGGAGTTTCCACAATGCTCTGGACGTGCCGTCCCGAGAAGGGGCGTTTGCACAGGGTGGCTGTCGGAGCTCATTTCCCCGATCCTCCAGCAGCATGGGAGACCATCGCGAGACCCCGACAGTGCTCTCGTCCCAAAGGTATCTATTGGTCTTCGCCCAAGCACTGCTTTCCATCTGCCCTCCGACCCAGCAGTGCCCTTCATCATGGTGGGGCCAGGTACAGGAGTCGCCCCCTTCATTGGGTTTCTCCAGCACAGAAAGTAG

Function

GO:

id name namespace
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K00597 MTRR; methionine synthase reductase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019473 True 1584 mRNA 0.50 11 22567943 22580204

Neighbor

gene id symbol gene type direction distance location
AMCG00019474 NA coding downstream 351272 22204987 ~ 22216671 (-)
AMCG00019461 cbln2b,LOC107662558,LOC107727212,LOC107589986,LOC107657802,LOC107596058,LOC107741967 coding downstream 695081 21870015 ~ 21872862 (-)
AMCG00019462 NA coding downstream 909013 21658265 ~ 21658930 (-)
AMCG00019458 NA coding downstream 1159113 21407461 ~ 21408830 (-)
AMCG00019457 NA coding downstream 1274206 21246788 ~ 21293737 (-)
AMCG00019476 NA coding upstream 8329 22588533 ~ 22590655 (-)
AMCG00019486 NA coding upstream 62446 22642650 ~ 22643552 (-)
AMCG00019484 ctnnd2a,LOC108438556,LOC106569223 coding upstream 249943 22830147 ~ 22844539 (-)
AMCG00019485 ctnnd2,LOC102780722,LOC100711149 coding upstream 297081 22877285 ~ 22888472 (-)
AMCG00019483 NA coding upstream 375574 22955778 ~ 22975128 (-)
G34283 LOC102215562 non-coding downstream 1021419 21546208 ~ 21546524 (-)
G34277 NA non-coding downstream 1129787 21437915 ~ 21438156 (-)
G34148 NA non-coding downstream 2018243 20478257 ~ 20549700 (-)
G34006 NA non-coding downstream 3086975 19467076 ~ 19480968 (-)
G33830 NA non-coding downstream 3952689 18606141 ~ 18615254 (-)
G34468 LOC103376870 non-coding upstream 538597 23118801 ~ 23120960 (-)
G34476 NA non-coding upstream 630037 23210241 ~ 23286999 (-)
G34502 NA non-coding upstream 996323 23576527 ~ 23578285 (-)
G34514 NA non-coding upstream 1030225 23610429 ~ 23642241 (-)
G34541 NA non-coding upstream 1318069 23898273 ~ 23947457 (-)
AMCG00019446 ube2w other downstream 1802447 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 3112974 19442395 ~ 19454969 (-)
AMCG00019417 NA other downstream 3266396 19294812 ~ 19301547 (-)
AMCG00019396 NA other downstream 4125962 18384867 ~ 18441981 (-)
G33381 ube2v2,LOC107732116 other downstream 6846491 15692482 ~ 15721452 (-)
AMCG00019487 NA other upstream 90443 22670647 ~ 22744182 (-)
G34470 NA other upstream 567657 23147861 ~ 23199608 (-)
AMCG00019500 pign other upstream 1471807 24052011 ~ 24094664 (-)
G35067 NA other upstream 6937792 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 6955540 29535744 ~ 29550162 (-)

Expression


Co-expression Network