AMCG00019474


Basic Information

Item Value
gene id AMCG00019474
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 22204987 ~ 22216671 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019474
ATGTGCTTCGCAGTTGGAGTAGAGGGGGATCCTGCAAAAATCAAGGAGGGAGAGCTGAGCATTAACCCAGTCAAAATGCAGCTCCTCTCTCCTTGTTTGCACATGCTCCCATACCTTCACTTTGGGCTGAAAGATCAGGAGAAAAGGTATCGTCAACGATATCTTGATTTGATCACGAATGAGTCTGTGACACAAAAGTTCATTAAGAGAACTAAAATTATACAATACCTAAAGAAGTTCCTGGATAGTCTTGGATTTCTGGAGCACTTGAAACTGGATTATTTTGCCATTTCGTACTCCTACTCTGGCACCGTTCTGAAGAAGGACTTTCGGAACGATTTGAAGAACAAGCTGAGCAATGCCTTCACTGAGCTGAATGATCCTCACAAACAGCATGAGCTTTTTGAAGACCAAGCCAAGGTTCTTCTGTTTCCTGCCATGAAACCAGATGACAACAAGCAAACTGAGAAGGGCAGGAATATGAGCAACTTTGGGAGAGTCGCCCTGGCGTCTCTGCACCGACACCTGTCCAGCCCTGCCATGTTTGCCCTGGTTGCCCGTCCTCAGGGTGCTGTCGGTGGAGATGCCTTTGCTGGGCAGGAGCAGGACAGGTCTGCAGGGCCGCACAGCGATCAGAGACGGCTCCGTGAGGTTGCAATAACCAGTCCTAAACGCTGTTTTCCCATTGTTTTGCAAGGATATGCTACTAGTGTGAGCTGGTTTAAAGAACTGAAAAATACAGCTATGAGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019474 True 753 mRNA 0.47 7 22204987 22216671

Neighbor

gene id symbol gene type direction distance location
AMCG00019461 cbln2b,LOC107662558,LOC107727212,LOC107589986,LOC107657802,LOC107596058,LOC107741967 coding downstream 332125 21870015 ~ 21872862 (-)
AMCG00019462 NA coding downstream 546057 21658265 ~ 21658930 (-)
AMCG00019458 NA coding downstream 796157 21407461 ~ 21408830 (-)
AMCG00019457 NA coding downstream 911250 21246788 ~ 21293737 (-)
AMCG00019456 NA coding downstream 962313 21234768 ~ 21242674 (-)
AMCG00019473 NA coding upstream 351272 22567943 ~ 22580204 (-)
AMCG00019476 NA coding upstream 371862 22588533 ~ 22590655 (-)
AMCG00019486 NA coding upstream 425979 22642650 ~ 22643552 (-)
AMCG00019484 ctnnd2a,LOC108438556,LOC106569223 coding upstream 613476 22830147 ~ 22844539 (-)
AMCG00019485 ctnnd2,LOC102780722,LOC100711149 coding upstream 660614 22877285 ~ 22888472 (-)
G34283 LOC102215562 non-coding downstream 658463 21546208 ~ 21546524 (-)
G34277 NA non-coding downstream 766831 21437915 ~ 21438156 (-)
G34148 NA non-coding downstream 1655287 20478257 ~ 20549700 (-)
G34006 NA non-coding downstream 2724019 19467076 ~ 19480968 (-)
G33830 NA non-coding downstream 3589733 18606141 ~ 18615254 (-)
G34468 LOC103376870 non-coding upstream 902130 23118801 ~ 23120960 (-)
G34476 NA non-coding upstream 993570 23210241 ~ 23286999 (-)
G34502 NA non-coding upstream 1359856 23576527 ~ 23578285 (-)
G34514 NA non-coding upstream 1393758 23610429 ~ 23642241 (-)
G34541 NA non-coding upstream 1681602 23898273 ~ 23947457 (-)
AMCG00019446 ube2w other downstream 1439491 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 2750018 19442395 ~ 19454969 (-)
AMCG00019417 NA other downstream 2903440 19294812 ~ 19301547 (-)
AMCG00019396 NA other downstream 3763006 18384867 ~ 18441981 (-)
G33381 ube2v2,LOC107732116 other downstream 6483535 15692482 ~ 15721452 (-)
AMCG00019487 NA other upstream 453976 22670647 ~ 22744182 (-)
G34470 NA other upstream 931190 23147861 ~ 23199608 (-)
AMCG00019500 pign other upstream 1835340 24052011 ~ 24094664 (-)
G35067 NA other upstream 7301325 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 7319073 29535744 ~ 29550162 (-)

Expression


Co-expression Network