AMCG00019476


Basic Information

Item Value
gene id AMCG00019476
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 22588533 ~ 22590655 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019476
ATGGCAAACGAGGCTAAACCTTGCCCCTGCGACATTGGGGACAAGATGGACTACAGGGGTCTGGGAGAAGAGGTGCAGATTGAGCACATCCAAGCATATGTGACCAAGCCAACATCTGGCACAGACAAGGCCGTCATAGTCATTCAGGACATTTATGGGTGGCAGCTTCCCAACACCAGATATATGGCAGATCTGCTTGCATCTCATGGATATATAGCAATCTGCCCAGATTTCTATGTTGGCAAAGAACCTTGGAGACCTACTGATGATTGGTCAACATTTCAAGAGTGGCTTCAAGACAGGAAGCCAACCAACATAAATAGAGAGGCCGATGCAGTTCTTAAGTATCTGAAGGGAAGCTGTGGTGCGAAGAGGATAGCAGTTGTAGGGTTTTGCTGGGGTGGAGTTGCCACACACCACTTGATCCTGAATTACCCTGAGCTCAAAGCTGGTGTTTCTGTTTATGGAATAGTCCGAGAGACAGAAGACCGGTATAAATTACACAGccccacatttttcatttttgcagaaaatgaccACGTTATTCCACTTGACCAGGTGGCCACCCTGGAGAAGAAACTTCAAGAGCACTGTACAGTGGATTTTAAAGTCAAGATTTTCCCCGGCCAAACCCATGGATTTGTACACCGCAAGAGGGGAGATATAAATCCGAAAGACAAACCCATCATTGAAGAGGCCAGAAAGGACATGATTAATTGgttgaacaaatacatttaa

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K01061 E3.1.1.45; carboxymethylenebutenolidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019476 True 738 mRNA 0.46 5 22588533 22590655

Neighbor

gene id symbol gene type direction distance location
AMCG00019473 NA coding downstream 8329 22567943 ~ 22580204 (-)
AMCG00019474 NA coding downstream 371862 22204987 ~ 22216671 (-)
AMCG00019461 cbln2b,LOC107662558,LOC107727212,LOC107589986,LOC107657802,LOC107596058,LOC107741967 coding downstream 715671 21870015 ~ 21872862 (-)
AMCG00019462 NA coding downstream 929603 21658265 ~ 21658930 (-)
AMCG00019458 NA coding downstream 1179703 21407461 ~ 21408830 (-)
AMCG00019486 NA coding upstream 51995 22642650 ~ 22643552 (-)
AMCG00019484 ctnnd2a,LOC108438556,LOC106569223 coding upstream 239492 22830147 ~ 22844539 (-)
AMCG00019485 ctnnd2,LOC102780722,LOC100711149 coding upstream 286630 22877285 ~ 22888472 (-)
AMCG00019483 NA coding upstream 365123 22955778 ~ 22975128 (-)
AMCG00019482 NA coding upstream 621408 23212063 ~ 23226396 (-)
G34283 LOC102215562 non-coding downstream 1042009 21546208 ~ 21546524 (-)
G34277 NA non-coding downstream 1150377 21437915 ~ 21438156 (-)
G34148 NA non-coding downstream 2038833 20478257 ~ 20549700 (-)
G34006 NA non-coding downstream 3107565 19467076 ~ 19480968 (-)
G33830 NA non-coding downstream 3973279 18606141 ~ 18615254 (-)
G34468 LOC103376870 non-coding upstream 528146 23118801 ~ 23120960 (-)
G34476 NA non-coding upstream 619586 23210241 ~ 23286999 (-)
G34502 NA non-coding upstream 985872 23576527 ~ 23578285 (-)
G34514 NA non-coding upstream 1019774 23610429 ~ 23642241 (-)
G34541 NA non-coding upstream 1307618 23898273 ~ 23947457 (-)
AMCG00019446 ube2w other downstream 1823037 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 3133564 19442395 ~ 19454969 (-)
AMCG00019417 NA other downstream 3286986 19294812 ~ 19301547 (-)
AMCG00019396 NA other downstream 4146552 18384867 ~ 18441981 (-)
G33381 ube2v2,LOC107732116 other downstream 6867081 15692482 ~ 15721452 (-)
AMCG00019487 NA other upstream 79992 22670647 ~ 22744182 (-)
G34470 NA other upstream 557206 23147861 ~ 23199608 (-)
AMCG00019500 pign other upstream 1461356 24052011 ~ 24094664 (-)
G35067 NA other upstream 6927341 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 6945089 29535744 ~ 29550162 (-)

Expression


Co-expression Network