AMCG00019479


Basic Information

Item Value
gene id AMCG00019479
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 22670411 ~ 22688277 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019479
ATGGTGCTGATCGCGGACGACAGGGATGGAGGAGGACCCTCTCCTGTCAAACTAAAGCAAGTTCAGCAAAGTAAAAGTGCAGGCGCAGGGCTGGATGCAGCCGCTGCCTCCTCGGACTCGGACAGCGACCAGTACCTGGGCTCGGCGGATCTGgacgaggaggaagaggagtatgaggAGTATGATGATTTCTCCCAGCTGCCCGACACCCGCAGCATCGCCTCGGACGACTCCTTCTACCCGCCCGGGGACCTGTGCCAGTCGGAGGAGGAGCGGGGACCGACCCCGGACAGCCCGGAGCCGCTGTCCTTCTTCCAGGCGTGCTGCACCAACAACCCCATGATAGTGAAGATCATGATCCGACAGGGGGTGACGGAGGAGGAGGTGAGGAAGACCGATAAGAACAACAGGccactAATATCAGAAAGGTGCCATGAGACCCATGCAGAAGCCACATTGAACACGAGCTGTGAGGTGCTGAAGAACCCTTTGAGAAAGGGCTCAAAGCTGTCCCATTTCCCAAGGGAACAAGAGCAAGGGCCATTATGCACCAACCAGAAAACTTCTGCTGAAGAGTTTTTTTTGAGTGGAAATACCAGAAATGGGTGTATTAAAAGCAGTGACAATTGCTCCAGTGAGAAATTGTCCACCTGCCAAACTGTCAGAAGACACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019479 True 675 mRNA 0.55 4 22670411 22688277

Neighbor

gene id symbol gene type direction distance location
AMCG00019478 ropn1l coding upstream 13502 22644268 ~ 22656909 (+)
AMCG00019470 cct5,LOC107686714,LOC107695377 coding upstream 82277 22582760 ~ 22588134 (+)
AMCG00019469 sema5a,LOC108426609,LOC106578437 coding upstream 215882 22390170 ~ 22454529 (+)
AMCG00019466 fam173b,LOC105900597,LOC106599314,LOC108440663 coding upstream 364762 22298873 ~ 22305649 (+)
AMCG00019465 LOC105921547 coding upstream 386052 22270509 ~ 22284359 (+)
AMCG00019477 NA coding downstream 5415 22693692 ~ 22702036 (+)
AMCG00019488 NA coding downstream 878304 23566581 ~ 23575527 (+)
AMCG00019494 NA coding downstream 1407018 24095295 ~ 24102633 (+)
AMCG00019493 NA coding downstream 1420685 24108962 ~ 24149017 (+)
AMCG00019495 NA coding downstream 1465220 24153497 ~ 24178723 (+)
G34378 NA non-coding upstream 92939 22575974 ~ 22577472 (+)
G34278 NA non-coding upstream 1208520 21461682 ~ 21461891 (+)
G34235 NA non-coding upstream 1579995 21090144 ~ 21090416 (+)
G34204 NA non-coding upstream 1893795 20771526 ~ 20776616 (+)
G34192 NA non-coding upstream 1923440 20672987 ~ 20746971 (+)
G34432 LOC107584984,LOC108256437,LOC107701635 non-coding downstream 91954 22780231 ~ 22783116 (+)
G34433 NA non-coding downstream 100731 22789008 ~ 22789463 (+)
G34435 NA non-coding downstream 111123 22799400 ~ 22799718 (+)
G34436 LOC107686039,LOC107746909 non-coding downstream 129866 22818143 ~ 22818460 (+)
G34438 NA non-coding downstream 192903 22881180 ~ 22888739 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other upstream 27185 22615623 ~ 22643226 (+)
G34170 rpl7 other upstream 2059522 20607474 ~ 20610889 (+)
AMCG00019428 LOC107595150 other upstream 3215274 19451247 ~ 19455137 (+)
AMCG00019415 NA other upstream 3376203 19285536 ~ 19294208 (+)
AMCG00019402 NA other upstream 3648999 19005024 ~ 19021412 (+)
AMCG00019481 NA other downstream 497539 23185816 ~ 23204250 (+)
AMCG00019480 NA other downstream 544993 23233270 ~ 23248099 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other downstream 983848 23672125 ~ 23695801 (+)
AMCG00019492 NA other downstream 1357412 24045689 ~ 24086481 (+)
AMCG00019496 NA other downstream 1527600 24215877 ~ 24219991 (+)

Expression


Co-expression Network