AMCG00019486


Basic Information

Item Value
gene id AMCG00019486
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 22642650 ~ 22643552 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019486
ATGGATGTAGGCGAGTACTTGAGAAGGATTGATTATACAGGACCAGTGGAGCCCACCCTGGAGGCACTGCAACAAATACATCTTCGCCACTTGTTGTCTGTGCCCTTTGAAAACCTCACCATTCACAGTGGAGGGAAAATCTTGTTGGAAAGGCCATTGATTTATGACAAAGTTGTTAAGCAGCGTCGTGGAGGGTTTTGCTTCGAGATCAATGGGATTTTCTCGTGGTTACTGTCCCAGATGGGGTTTGAAGTCACCCTGCTTTCTGCCCAGGTTCGCAACAGTATTACTGGTTGCTATGGGCCTCCCTTTGACCACCTCATCATCCTGGTGGCCCTAGAGGGGCAGAGATGGCTCTGTGACGTAGGCTTTGGAGAAGGCTTCCAGCTTCCATTGTCACTGGAGACTCACGGGCCTCTGAAGCAGGGAAACGGCGTGTTTCAACTCCGGCATCAGGGAGAAACCATTTTCCTGGAGACTGTTATGAAAGGGCAAGGACAAGAAAATGGGAGGggacagaaaacagaatatGGACACCAAGAGGAGCTGATGAAAGAAGAGCAACAGGTTGGCTGGTTGCAGCTGTATAAATTCACTCTTCAACCACGTCACCTGGAGGAATTCAAGGCAATGTGTCATTACCATCAGACCTCCCCCAGTTCGCTTTTCTACTGCAAGTCACTCTGTTCTCTTCTCATGCCCAATGGGAGGATTACTTATATAGGCCGCAAACTAATAATCACCCGGTATTCATCTGACGGTGGAGGAGACGTGATAAAGACCACCATGGAGCTGTCAGACGAGGAGATCCCAGACACTGTTAAAGAGAAGTTTGGAATAAAATTGCAATCTCCTCTTACTCCAAAAAATGAGGACATCATTCCACCCCCTACCATTTATTAG

Function

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG:

id description
K00622 nat; arylamine N-acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019486 True 903 mRNA 0.48 1 22642650 22643552

Neighbor

gene id symbol gene type direction distance location
AMCG00019476 NA coding downstream 51995 22588533 ~ 22590655 (-)
AMCG00019473 NA coding downstream 62446 22567943 ~ 22580204 (-)
AMCG00019474 NA coding downstream 425979 22204987 ~ 22216671 (-)
AMCG00019461 cbln2b,LOC107662558,LOC107727212,LOC107589986,LOC107657802,LOC107596058,LOC107741967 coding downstream 769788 21870015 ~ 21872862 (-)
AMCG00019462 NA coding downstream 983720 21658265 ~ 21658930 (-)
AMCG00019484 ctnnd2a,LOC108438556,LOC106569223 coding upstream 186595 22830147 ~ 22844539 (-)
AMCG00019485 ctnnd2,LOC102780722,LOC100711149 coding upstream 233733 22877285 ~ 22888472 (-)
AMCG00019483 NA coding upstream 312226 22955778 ~ 22975128 (-)
AMCG00019482 NA coding upstream 568511 23212063 ~ 23226396 (-)
AMCG00019490 LOC106578414 coding upstream 970575 23614127 ~ 23619816 (-)
G34283 LOC102215562 non-coding downstream 1096126 21546208 ~ 21546524 (-)
G34277 NA non-coding downstream 1204494 21437915 ~ 21438156 (-)
G34148 NA non-coding downstream 2092950 20478257 ~ 20549700 (-)
G34006 NA non-coding downstream 3161682 19467076 ~ 19480968 (-)
G33830 NA non-coding downstream 4027396 18606141 ~ 18615254 (-)
G34468 LOC103376870 non-coding upstream 475249 23118801 ~ 23120960 (-)
G34476 NA non-coding upstream 566689 23210241 ~ 23286999 (-)
G34502 NA non-coding upstream 932975 23576527 ~ 23578285 (-)
G34514 NA non-coding upstream 966877 23610429 ~ 23642241 (-)
G34541 NA non-coding upstream 1254721 23898273 ~ 23947457 (-)
AMCG00019446 ube2w other downstream 1877154 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 3187681 19442395 ~ 19454969 (-)
AMCG00019417 NA other downstream 3341103 19294812 ~ 19301547 (-)
AMCG00019396 NA other downstream 4200669 18384867 ~ 18441981 (-)
G33381 ube2v2,LOC107732116 other downstream 6921198 15692482 ~ 15721452 (-)
AMCG00019487 NA other upstream 27095 22670647 ~ 22744182 (-)
G34470 NA other upstream 504309 23147861 ~ 23199608 (-)
AMCG00019500 pign other upstream 1408459 24052011 ~ 24094664 (-)
G35067 NA other upstream 6874444 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 6892192 29535744 ~ 29550162 (-)

Expression


Co-expression Network