AMCG00019494


Basic Information

Item Value
gene id AMCG00019494
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 24095295 ~ 24102633 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019494
ATGGCGGCGGGCAGCGTCAACCCGTTTAATCTGAGCGACTCCGAGGAGGAGGCTGAGCGGAGGCCGGAGGGAGCCGACGGCGAGCGCAGCCTTGGCGATGGGACGGCGGGTCAGCGCGGCGGTCCCCTCTCCCCGCAGGTGGACTCGGAGCCGGGGGGACTGATGCTGTCCGGTCACAGGACGAGCCCCGGTGTGGAAGGGGTCTCTGTCTCTGCCGCAGCCGCTATGGGAGGCGGTGCGGAGGCACGGGTGTCCGTGGATGTGATCGCGTCCCAGCTGCTCCGGGATCAGTACATCCTCACCGCCCTGGAGTTGCACACCGAGCTGCTGGAGGCCGGGAGAGAGCTTCCTCGTCTCCGCGATTACTTCTCCAATCCCGGCAACTTCGAGAGGCAGAGTGGGACTCCGCCCGCTGGTAAGGAGCCGGGGATCGGACAAGGAGGACCGCTGAGTGAGTACCTGTCTTACAGTGCGTGTTATACCGTGCAAACACCGACGATGCAACGCAGAGAAACATGCATTGCAATCAAGATGCTATTTAGAAGAATGGAAATGGTGACACTAGAGAAAGAGACAGCTGAGGTGCTGAACGGTATCAAAATCCCCATATTGTCAGGGATGCTCTTGACAACAGAGATAGGCGTCAGCCCTCCTGCTGCAATGACAGATGGGGATGTTAAGGATGCACCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019494 True 693 mRNA 0.61 3 24095295 24102633

Neighbor

gene id symbol gene type direction distance location
AMCG00019488 NA coding upstream 519768 23566581 ~ 23575527 (+)
AMCG00019477 NA coding upstream 1393259 22693692 ~ 22702036 (+)
AMCG00019479 NA coding upstream 1407018 22670411 ~ 22688277 (+)
AMCG00019478 ropn1l coding upstream 1438386 22644268 ~ 22656909 (+)
AMCG00019470 cct5,LOC107686714,LOC107695377 coding upstream 1507161 22582760 ~ 22588134 (+)
AMCG00019493 NA coding downstream 6329 24108962 ~ 24149017 (+)
AMCG00019495 NA coding downstream 50864 24153497 ~ 24178723 (+)
AMCG00019499 NA coding downstream 77562 24180195 ~ 24182210 (+)
AMCG00019498 NA coding downstream 83039 24185672 ~ 24191616 (+)
AMCG00019497 NA coding downstream 105934 24208567 ~ 24215367 (+)
G34510 zfhx4,LOC107586695 non-coding upstream 424252 23670582 ~ 23671043 (+)
G34509 zfhx4,LOC107705239,LOC107666618,LOC107586695 non-coding upstream 440650 23654427 ~ 23654645 (+)
G34457 NA non-coding upstream 808317 23210255 ~ 23286978 (+)
G34446 NA non-coding upstream 1131297 22963457 ~ 22963998 (+)
G34445 LOC107590286,LOC107591257,LOC107701635,LOC108438556 non-coding upstream 1165985 22929020 ~ 22929310 (+)
G34581 NA non-coding downstream 42506 24145139 ~ 24145909 (+)
G34621 NA non-coding downstream 136783 24239416 ~ 24239813 (+)
G34632 NA non-coding downstream 224807 24327440 ~ 24328019 (+)
G34695 NA non-coding downstream 999756 25102389 ~ 25103872 (+)
G34704 NA non-coding downstream 1018537 25121170 ~ 25121378 (+)
AMCG00019492 NA other upstream 8814 24045689 ~ 24086481 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other upstream 399494 23672125 ~ 23695801 (+)
AMCG00019480 NA other upstream 847196 23233270 ~ 23248099 (+)
AMCG00019481 NA other upstream 891045 23185816 ~ 23204250 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other upstream 1452069 22615623 ~ 22643226 (+)
AMCG00019496 NA other downstream 113244 24215877 ~ 24219991 (+)
AMCG00019535 NA other downstream 4510622 28613255 ~ 28710887 (+)
AMCG00019551 lsm5 other downstream 5198322 29300955 ~ 29305006 (+)
AMCG00019605 NA other downstream 8207404 32310037 ~ 32317571 (+)
AMCG00019609 NA other downstream 8221767 32324400 ~ 32392976 (+)

Expression


Co-expression Network