AMCG00019502


Basic Information

Item Value
gene id AMCG00019502
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 24219089 ~ 24466531 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019502
CATGAAGCTCCTTCCCGGTTCCAATGCGGGTATGGTAGGAGGCAACAAAGTCCTGCAAGTGGCCAGGACGCTGTCGCACATGTTGTGGCCGGGCCACAGGCACAGCTGGTGTGGGGCCCCTGCCATCTGCCACGTGGTTGTGGGGAAGATGTTCAATCTTGCCCAAATTACATCTGCCAGGAGTGCTGAGGAGATGTCATACGACCATCATTTGACCAATTTGATGATGGCAgcTAATTTTGTTAGGTACATGGTTTTGCAGACCCATGTCTTGgatggTCAAGTTCTTCCCCTGCAGGGCAGTAATGTTGTGTTGGAAGAGATTCAGAGTAGGATTCTGCGCTTCCTGCAGCAGGCTACCACTTGGGCGTCAGATAAACGCTGTGCTGGGGTAAGCTTTCGAATCCTGTCCAGCTCACTGCTTGGCCTGCCAGATCTCGCAGTGCTGCAGATAATCAACCATAGCGGAACACAGAAGTTCTGTTTGCTGATCCTTAATCAGCCTCTAGATGAAGACTACTTTCATCAGCTTTGGAGGAAAGATCCCCGGGCACTGTCATCTTTCAGAGAGGGATCCTTCTGTCAAAGTCCTCGTGTCATGTTGCCCATCAGCAGCTCTCTGAAGTCCAAGAACTGCACTGGACTGTTGGCCAACAATGAGTCGGAAGATAACAGTTTTCTGCCTGACTACATCAGTGGGGATTTCGATTCCATTAAACCAGAAGTCAAAGAGTTCTACAATAACAAgaAATGCAAGCTCATAGAAACTGAAGATCAGGACCTAACAGACTTCACCAAGTGCCTCAGCATCCTAGTGGAAGAAATAAAGAAGCAGCGTTTACAGGTGGATACCATAGTGATACTGGGTGGGCTGGCGGGGCGCTTTGATCAAACAATGGCTACTGTGGAGACCCTCTTCCATGCCCTCAACATGACAGACCTGCCTATCATTGTAATTCAGGGATTTTCACTGGCATATCTGCTCAGACCGTGTAAGCAGCACAGTCTGAATGTGAATACGGGTCTGGAGGGAGACTGGTGCAGCCTGATTCCGGTGGGGGGTCCGTGCAACACAATCACCACCGGCTTGAAATGGAACCTCAGTAAGTGGGACTCCTTTATATCACCCAGAAACAATTACCTTAAATCATTCAAAACTGTTCTTTTGTGTATtggaaaacagaagaaagaaatgGTATCTAGGGGAAAAACACTGTGTAAGATTGGTCAAGATAATCAGTTGCTTCAATTTGGAAAACTGGTCAGCACCTCCAATACATACGAGTCCCACGACCCCCAAGAGGGGAGAAAGCTGGTGACTGTGAGGACGGACCAGCCGCTGCTCTGGAGCATGGGCATTCGCAAGAAA

Function

GO: NA

KEGG:

id description
K00949 thiN, TPK1, THI80; thiamine pyrophosphokinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019502 True 1369 mRNA 0.49 15 24219089 24466531

Neighbor

gene id symbol gene type direction distance location
AMCG00019501 hnf4g coding downstream 208035 24001200 ~ 24011054 (-)
AMCG00019489 zfhx4,LOC107721891,LOC107590192 coding downstream 544404 23670530 ~ 23674685 (-)
AMCG00019491 zfhx4 coding downstream 596096 23620148 ~ 23622993 (-)
AMCG00019490 LOC106578414 coding downstream 599273 23614127 ~ 23619816 (-)
AMCG00019482 NA coding downstream 992693 23212063 ~ 23226396 (-)
AMCG00019510 ezh2 coding upstream 599015 25065546 ~ 25080710 (-)
AMCG00019511 pdia4,LOC107727231,LOC107741760,LOC107686698,LOC107695410 coding upstream 631823 25098354 ~ 25102573 (-)
AMCG00019512 NA coding upstream 639761 25106292 ~ 25139317 (-)
AMCG00019509 hus1 coding upstream 686326 25152857 ~ 25158446 (-)
AMCG00019521 NA coding upstream 1052496 25519027 ~ 25522993 (-)
G34596 NA non-coding downstream 72238 24146194 ~ 24146851 (-)
G34541 NA non-coding downstream 271632 23898273 ~ 23947457 (-)
G34514 NA non-coding downstream 576848 23610429 ~ 23642241 (-)
G34502 NA non-coding downstream 640804 23576527 ~ 23578285 (-)
G34476 NA non-coding downstream 932090 23210241 ~ 23286999 (-)
G34763 LOC107656144 non-coding upstream 1045553 25512084 ~ 25515224 (-)
G34831 NA non-coding upstream 1349162 25815693 ~ 25816056 (-)
G34846 NA non-coding upstream 1706531 26173062 ~ 26211553 (-)
G34853 NA non-coding upstream 1825824 26292355 ~ 26336737 (-)
G34859 NA non-coding upstream 1910586 26377117 ~ 26377354 (-)
AMCG00019500 pign other downstream 124425 24052011 ~ 24094664 (-)
G34470 NA other downstream 1019481 23147861 ~ 23199608 (-)
AMCG00019487 NA other downstream 1474907 22670647 ~ 22744182 (-)
AMCG00019446 ube2w other downstream 3453593 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 4764120 19442395 ~ 19454969 (-)
G35067 NA other upstream 5051465 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 5069213 29535744 ~ 29550162 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other upstream 5172035 29638566 ~ 29645963 (-)
G35101 NA other upstream 5212698 29679229 ~ 29685302 (-)
AMCG00019597 NA other upstream 6955498 31422029 ~ 31427583 (-)

Expression


Co-expression Network