AMCG00019508


Basic Information

Item Value
gene id AMCG00019508
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 25169668 ~ 25213712 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019508
ATGAAGAGCGACTTGGGAAAGCCTTTGTTTTACACTGACTCAGTCCTGACCCAGTCCTTAGCGCTCAAGGCCTGGTTCtttaatGCATTCACTACCACCCCTTTCCTGCTTTTGTTCACCAAGTGCAACATGCTTCTTGTCGTCAGTGACATCCTTGTCAGTCCTCAGCagacttttccttttctgtgctTTCCCCTCAGCCAAGtgaaTGCCTTGATGACGTGTGGACTGTCAGcaacagaaaataaaaataagaagacACCCTCACCGTCCCAATTAAAAGTCTGCAATGAAACGGCTCTGCAGCTGGTGATGGAGGGTTGTGGGGATATCTTCAAACATGAAATGATGCATTGGGTTTTACAGAAAAAGCTGGCAGATGAAGCTGGAGTACAGATGAAGGAACTTCAGCTAGTGAAGACTATGTCTCAAAGGGGCATCCAGAAAGATTTGGTGTACTACGATTTTTCATCCTGCACGGAAAAGAGTGCACAGCACATGGGCTGCTATTGGCCCAACCCTCAGGTGGAGAGCTACATCATCTCTATCCATAAACACTTTTTCTTGAACTGTTCCTTGGACCGGGTGATGTGGCTGGACCCTCCAGATGACACCCTCACCGTGCTCATCTTCGTTCCTGTGTGTCTGACACTGGCCATGATTGCCTTGGTTGTGTGGTGCAGCAAGCGCAGTGACATCCTGTTATATGTGCTGATATGTATCAAATGGTGCGGAGACATGTTGCTGCCTACTCAGCACAAAGATATTAAGCTCTCTGGACATTCGGAAGAAGTAGCAGGGCTTCTAGCCATGCTATTATACATTACTATGCGTTGCTACAGCTATTTAAGTAAAgGAATATAA

Function

GO: NA

KEGG:

id description
K08449 RAMP3; receptor activity modifying protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019508 True 864 mRNA 0.46 8 25169668 25213712

Neighbor

gene id symbol gene type direction distance location
AMCG00019507 cul1a,LOC106599302,LOC105024245,LOC106569218,LOC108433080,LOC107663526,LOC107656141,LOC108280768 coding upstream 106094 25028594 ~ 25063574 (+)
AMCG00019506 cntnap2,cntnap2a,LOC107695381,LOC107741949,LOC107686721 coding upstream 179326 24984428 ~ 24990342 (+)
AMCG00019504 NA coding upstream 217544 24949451 ~ 24952124 (+)
AMCG00019505 cntnap2a,cntnap2,LOC107595149 coding upstream 289112 24810551 ~ 24880556 (+)
AMCG00019503 cntnap2,LOC107595149 coding upstream 410364 24746477 ~ 24759304 (+)
AMCG00019514 NA coding downstream 38467 25252179 ~ 25299619 (+)
AMCG00019513 NA coding downstream 97047 25310759 ~ 25343687 (+)
AMCG00019515 NA coding downstream 131110 25344822 ~ 25345076 (+)
AMCG00019517 NA coding downstream 160234 25373946 ~ 25407885 (+)
AMCG00019516 NA coding downstream 227607 25441319 ~ 25466929 (+)
G34704 NA non-coding upstream 48290 25121170 ~ 25121378 (+)
G34695 NA non-coding upstream 65796 25102389 ~ 25103872 (+)
G34632 NA non-coding upstream 841649 24327440 ~ 24328019 (+)
G34621 NA non-coding upstream 929855 24239416 ~ 24239813 (+)
G34581 NA non-coding upstream 1023759 24145139 ~ 24145909 (+)
G34742 anks6 non-coding downstream 128549 25342261 ~ 25347728 (+)
G34834 NA non-coding downstream 1037712 26251424 ~ 26344732 (+)
G34838 NA non-coding downstream 1084809 26298521 ~ 26300352 (+)
G34863 NA non-coding downstream 1301933 26515645 ~ 26515916 (+)
G34893 NA non-coding downstream 1904812 27118524 ~ 27156206 (+)
AMCG00019496 NA other upstream 949677 24215877 ~ 24219991 (+)
AMCG00019492 NA other upstream 1083187 24045689 ~ 24086481 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other upstream 1473867 23672125 ~ 23695801 (+)
AMCG00019480 NA other upstream 1921569 23233270 ~ 23248099 (+)
AMCG00019481 NA other upstream 1965418 23185816 ~ 23204250 (+)
AMCG00019535 NA other downstream 3399543 28613255 ~ 28710887 (+)
AMCG00019551 lsm5 other downstream 4087243 29300955 ~ 29305006 (+)
AMCG00019605 NA other downstream 7096325 32310037 ~ 32317571 (+)
AMCG00019609 NA other downstream 7110688 32324400 ~ 32392976 (+)
AMCG00019638 LOC107757182 other downstream 9240497 34454209 ~ 34578440 (+)

Expression


Co-expression Network