AMCG00019515


Basic Information

Item Value
gene id AMCG00019515
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 25344822 ~ 25345076 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019515
ATGGCTGTCATGGCGGCCCTGTGGTGGGTTGCTATGAAAATACAAGAGGGATGGGTAAGTGAGCCCAGGTGTCAGCACACACAAGCTGCCCAGCTCTTCTCAACGCCAGTGTCCCAGTGCATCGCTGTGAGCAGGAGGACACTGAAGGATGGACTCCCTGAAGACAGCTACTCCGAGCTAAGGGAATGGAGCAGCCAGACCATGGGCCTTTTGGGCAACAGTGGTGGCCCTGAGAAGGAGGGGATACGACCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019515 True 255 mRNA 0.57 1 25344822 25345076

Neighbor

gene id symbol gene type direction distance location
AMCG00019513 NA coding upstream 1135 25310759 ~ 25343687 (+)
AMCG00019514 NA coding upstream 45203 25252179 ~ 25299619 (+)
AMCG00019508 NA coding upstream 131110 25169668 ~ 25213712 (+)
AMCG00019507 cul1a,LOC106599302,LOC105024245,LOC106569218,LOC108433080,LOC107663526,LOC107656141,LOC108280768 coding upstream 281248 25028594 ~ 25063574 (+)
AMCG00019506 cntnap2,cntnap2a,LOC107695381,LOC107741949,LOC107686721 coding upstream 354480 24984428 ~ 24990342 (+)
AMCG00019517 NA coding downstream 28870 25373946 ~ 25407885 (+)
AMCG00019516 NA coding downstream 96243 25441319 ~ 25466929 (+)
AMCG00019519 exoc3,LOC107757821,LOC107656144,LOC106569216 coding downstream 135343 25480419 ~ 25515290 (+)
AMCG00019520 pdcd6,LOC106579627 coding downstream 181155 25526231 ~ 25536916 (+)
AMCG00019518 NA coding downstream 194657 25539733 ~ 25559090 (+)
G34704 NA non-coding upstream 223444 25121170 ~ 25121378 (+)
G34695 NA non-coding upstream 240950 25102389 ~ 25103872 (+)
G34632 NA non-coding upstream 1016803 24327440 ~ 24328019 (+)
G34621 NA non-coding upstream 1105009 24239416 ~ 24239813 (+)
G34581 NA non-coding upstream 1198913 24145139 ~ 24145909 (+)
G34834 NA non-coding downstream 906348 26251424 ~ 26344732 (+)
G34838 NA non-coding downstream 953445 26298521 ~ 26300352 (+)
G34863 NA non-coding downstream 1170569 26515645 ~ 26515916 (+)
G34893 NA non-coding downstream 1773448 27118524 ~ 27156206 (+)
G34912 NA non-coding downstream 2135245 27480321 ~ 27480677 (+)
AMCG00019496 NA other upstream 1124831 24215877 ~ 24219991 (+)
AMCG00019492 NA other upstream 1258341 24045689 ~ 24086481 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other upstream 1649021 23672125 ~ 23695801 (+)
AMCG00019480 NA other upstream 2096723 23233270 ~ 23248099 (+)
AMCG00019481 NA other upstream 2140572 23185816 ~ 23204250 (+)
AMCG00019535 NA other downstream 3268179 28613255 ~ 28710887 (+)
AMCG00019551 lsm5 other downstream 3955879 29300955 ~ 29305006 (+)
AMCG00019605 NA other downstream 6964961 32310037 ~ 32317571 (+)
AMCG00019609 NA other downstream 6979324 32324400 ~ 32392976 (+)
AMCG00019638 LOC107757182 other downstream 9109133 34454209 ~ 34578440 (+)

Expression


Co-expression Network