Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019526 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 26170249 ~ 26193526 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019526 | True | 1059 | mRNA | 0.45 | 5 | 26170249 | 26193526 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019523 | bmp6,LOC107664667,LOC107678510,LOC107730008,LOC107382712,LOC106530850 | coding | upstream | 568804 | 25587990 ~ 25601445 (+) |
| AMCG00019522 | NA | coding | upstream | 609958 | 25559830 ~ 25560291 (+) |
| AMCG00019518 | NA | coding | upstream | 611159 | 25539733 ~ 25559090 (+) |
| AMCG00019520 | pdcd6,LOC106579627 | coding | upstream | 633333 | 25526231 ~ 25536916 (+) |
| AMCG00019519 | exoc3,LOC107757821,LOC107656144,LOC106569216 | coding | upstream | 654959 | 25480419 ~ 25515290 (+) |
| AMCG00019528 | cdh18,LOC102798556,LOC102310872 | coding | downstream | 655799 | 26849325 ~ 26857024 (+) |
| AMCG00019531 | LOC106578564,LOC106590046 | coding | downstream | 704141 | 26897667 ~ 26900729 (+) |
| AMCG00019530 | NA | coding | downstream | 759171 | 26952697 ~ 26957589 (+) |
| AMCG00019529 | NA | coding | downstream | 1086194 | 27279720 ~ 27282910 (+) |
| AMCG00019533 | NA | coding | downstream | 1841158 | 28034684 ~ 28034998 (+) |
| G34742 | anks6 | non-coding | upstream | 822521 | 25342261 ~ 25347728 (+) |
| G34704 | NA | non-coding | upstream | 1048871 | 25121170 ~ 25121378 (+) |
| G34695 | NA | non-coding | upstream | 1066377 | 25102389 ~ 25103872 (+) |
| G34632 | NA | non-coding | upstream | 1842230 | 24327440 ~ 24328019 (+) |
| G34621 | NA | non-coding | upstream | 1930436 | 24239416 ~ 24239813 (+) |
| G34834 | NA | non-coding | downstream | 57898 | 26251424 ~ 26344732 (+) |
| G34838 | NA | non-coding | downstream | 104995 | 26298521 ~ 26300352 (+) |
| G34863 | NA | non-coding | downstream | 322119 | 26515645 ~ 26515916 (+) |
| G34893 | NA | non-coding | downstream | 924998 | 27118524 ~ 27156206 (+) |
| G34912 | NA | non-coding | downstream | 1286795 | 27480321 ~ 27480677 (+) |
| AMCG00019496 | NA | other | upstream | 1950258 | 24215877 ~ 24219991 (+) |
| AMCG00019492 | NA | other | upstream | 2083768 | 24045689 ~ 24086481 (+) |
| G34511 | zfhx4,LOC107590192,LOC107721891 | other | upstream | 2474448 | 23672125 ~ 23695801 (+) |
| AMCG00019480 | NA | other | upstream | 2922150 | 23233270 ~ 23248099 (+) |
| AMCG00019481 | NA | other | upstream | 2965999 | 23185816 ~ 23204250 (+) |
| AMCG00019535 | NA | other | downstream | 2419729 | 28613255 ~ 28710887 (+) |
| AMCG00019551 | lsm5 | other | downstream | 3107429 | 29300955 ~ 29305006 (+) |
| AMCG00019605 | NA | other | downstream | 6116511 | 32310037 ~ 32317571 (+) |
| AMCG00019609 | NA | other | downstream | 6130874 | 32324400 ~ 32392976 (+) |
| AMCG00019638 | LOC107757182 | other | downstream | 8260683 | 34454209 ~ 34578440 (+) |
