AMCG00019529


Basic Information

Item Value
gene id AMCG00019529
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 27279720 ~ 27282910 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019529
ATGGGCTGCGGGAGCAGTAAAGTATTGCCAGAGCCCCCCAAGAACTGCTATGTGGACTTCGTCAAATCGGTAGTGAAATACAAGAACAAACGAAAAGACTACGAGGCGGAGCCGCTGAAGCCCCCCGGGGGAAAGAGCGACTTCAGCGGCATCTGGAACAGAGATCAGGGCCAACACTTACTGTATGACATCAAGGCCTTGATTGGGAGAGGCAGCTTCAGCAGGGTGGTGCGTGTTGAGCACCGAGCTACAAAACAGCCCTTCGCTATCAAGATGATCGAGATCCGAGCTCGGGAGGGCAGGGAGGTGTGTGAGTCAGAGCTGAATGTCCTGAGGAGAGTGAGCCACCGGAACATAGTGCAGCTCATGGAGGTCTTCCAGTCACAGGACAGGGTCTACATGGTGATGGAGCTCGCCACTGGTGGAGAGCTGTTTGACCGCATAATTGCCAAGGGTTCTTTCACAGAGCGTGATGCCACCTGTGCTTTGCGCATGGTATTGGATGGTATTGAATACTTGCATAGTCTTGGGATTACTCACCGGGATCTGAAACCTGAGAACCTTTTGTACTACCACCCTGGCACCGATGCCAGAATCTTGGTGACCGATTTTGGGTTGGCAAGTTCGtcaaacaaagacagagactgGTCCATGCAGACAACTTGTGGAACCCCTGAGTACATTGCCCCTGAAATTCTGTTGAGAAGACCCTACTCGAGAGCTGTGGACATGTGGGCGCTTGGTGTCATCACATATATTATGCTGAGTGGATCTATGCCCTTTGAGGATGACAACCGCTCACGACTGTATAGGACAAtcctgaaaggaaaatatagCTTTGCTGGTGAT

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019529 True 849 mRNA 0.51 2 27279720 27282910

Neighbor

gene id symbol gene type direction distance location
AMCG00019530 NA coding upstream 322131 26952697 ~ 26957589 (+)
AMCG00019531 LOC106578564,LOC106590046 coding upstream 378991 26897667 ~ 26900729 (+)
AMCG00019528 cdh18,LOC102798556,LOC102310872 coding upstream 422696 26849325 ~ 26857024 (+)
AMCG00019526 NA coding upstream 1086194 26170249 ~ 26193526 (+)
AMCG00019523 bmp6,LOC107664667,LOC107678510,LOC107730008,LOC107382712,LOC106530850 coding upstream 1678275 25587990 ~ 25601445 (+)
AMCG00019533 NA coding downstream 751774 28034684 ~ 28034998 (+)
AMCG00019532 NA coding downstream 752100 28035010 ~ 28035417 (+)
AMCG00019534 LOC107714825 coding downstream 1429894 28712804 ~ 28730320 (+)
AMCG00019537 NA coding downstream 1543443 28826353 ~ 28889651 (+)
AMCG00019538 cdh20 coding downstream 1799803 29082713 ~ 29100803 (+)
G34893 NA non-coding upstream 123514 27118524 ~ 27156206 (+)
G34863 NA non-coding upstream 763804 26515645 ~ 26515916 (+)
G34834 NA non-coding upstream 934988 26251424 ~ 26344732 (+)
G34838 NA non-coding upstream 979368 26298521 ~ 26300352 (+)
G34742 anks6 non-coding upstream 1931992 25342261 ~ 25347728 (+)
G34912 NA non-coding downstream 197411 27480321 ~ 27480677 (+)
G34916 NA non-coding downstream 444507 27727417 ~ 27727643 (+)
G34921 NA non-coding downstream 477378 27760288 ~ 27760653 (+)
G34926 NA non-coding downstream 673857 27956767 ~ 27956966 (+)
G34930 NA non-coding downstream 891762 28174672 ~ 28193989 (+)
AMCG00019496 NA other upstream 3059729 24215877 ~ 24219991 (+)
AMCG00019492 NA other upstream 3193239 24045689 ~ 24086481 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other upstream 3583919 23672125 ~ 23695801 (+)
AMCG00019480 NA other upstream 4031621 23233270 ~ 23248099 (+)
AMCG00019481 NA other upstream 4075470 23185816 ~ 23204250 (+)
AMCG00019535 NA other downstream 1330345 28613255 ~ 28710887 (+)
AMCG00019551 lsm5 other downstream 2018045 29300955 ~ 29305006 (+)
AMCG00019605 NA other downstream 5027127 32310037 ~ 32317571 (+)
AMCG00019609 NA other downstream 5041490 32324400 ~ 32392976 (+)
AMCG00019638 LOC107757182 other downstream 7171299 34454209 ~ 34578440 (+)

Expression


Co-expression Network