AMCG00019541


Basic Information

Item Value
gene id AMCG00019541
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 28718080 ~ 28826591 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019541
ATGGCGTTGATCACCAGCGGGCACTTGACAATCCAGGAGAATATGATCAAAAATATGGACAATGTGTTCGACTCCATGATTTGCAGCTCTCTGTTGGCCTCCATTTGCAGCCTGCTTGCCATTGCAATAGACCGATACATCACAATCTTCTATGCCCTGCGCTACCACAACATCATGACACTTTCTGCCACAgtgtatgaaatatttatatTGACTTTAGATATGCAGGCTTACTCAGTCATGAAGTGCCGTGAGGGATTTAAAATGGAGTTGGgacagaaggagaggaggaacGACATCGGGAGAGATGTCAAGTATAGTGAAAGGAGAAGATGTCTTGAGCCAATTGCACGGTAG

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0006112 energy reserve metabolic process biological_process
GO:0030819 obsolete positive regulation of cAMP biosynthetic process biological_process
GO:0040008 regulation of growth biological_process
GO:0097009 energy homeostasis biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004977 melanocortin receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019541 True 357 mRNA 0.45 5 28718080 28826591

Neighbor

gene id symbol gene type direction distance location
AMCG00019536 drosha,rnasen,LOC107556767 coding downstream 6478 28660017 ~ 28711602 (-)
AMCG00019527 NA coding downstream 1338151 27353217 ~ 27379929 (-)
AMCG00019525 NA coding downstream 3079053 25631697 ~ 25639027 (-)
AMCG00019524 LOC105920200 coding downstream 3104951 25604902 ~ 25613129 (-)
AMCG00019521 NA coding downstream 3195087 25519027 ~ 25522993 (-)
AMCG00019540 NA coding upstream 328746 29155337 ~ 29155822 (-)
AMCG00019539 NA coding upstream 421973 29248564 ~ 29260695 (-)
AMCG00019543 NA coding upstream 452206 29278797 ~ 29300537 (-)
AMCG00019545 NA coding upstream 576750 29403341 ~ 29403998 (-)
AMCG00019544 NA coding upstream 577472 29404063 ~ 29405022 (-)
G34968 NA non-coding downstream 70813 28640232 ~ 28647267 (-)
G34933 NA non-coding downstream 505691 28212139 ~ 28212389 (-)
G34931 NA non-coding downstream 524081 28192767 ~ 28193999 (-)
G34929 NA non-coding downstream 750690 27967154 ~ 27967390 (-)
G34905 NA non-coding downstream 1316993 27350207 ~ 27401087 (-)
G35014 NA non-coding upstream 123376 28949967 ~ 28950230 (-)
G35083 NA non-coding upstream 805603 29632194 ~ 29633736 (-)
G35111 NA non-coding upstream 891754 29718345 ~ 29731767 (-)
G35129 NA non-coding upstream 944995 29771586 ~ 29772192 (-)
G35144 NA non-coding upstream 1000066 29826657 ~ 29828650 (-)
AMCG00019500 pign other downstream 4623416 24052011 ~ 24094664 (-)
G34470 NA other downstream 5518472 23147861 ~ 23199608 (-)
AMCG00019487 NA other downstream 5973898 22670647 ~ 22744182 (-)
AMCG00019446 ube2w other downstream 7952584 20743530 ~ 20765496 (-)
AMCG00019419 cpa6,LOC106579545 other downstream 9263111 19442395 ~ 19454969 (-)
G35067 NA other upstream 691405 29517996 ~ 29521984 (-)
AMCG00019556 NA other upstream 709153 29535744 ~ 29550162 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other upstream 811975 29638566 ~ 29645963 (-)
G35101 NA other upstream 852638 29679229 ~ 29685302 (-)
AMCG00019597 NA other upstream 2595438 31422029 ~ 31427583 (-)

Expression


Co-expression Network