AMCG00019557


Basic Information

Item Value
gene id AMCG00019557
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 29761329 ~ 29766606 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019557
TCTAAACCTACAGGAAGTAGAGCTAAGATCATTCACTGCATCGTGTTGAGATGTAAAGGATTATAGAGAACATCACAGTATGTGTCTATTTCATTACAGGAATGGCATCAATGGAAGGACTGAGTTCTGCAAACACCCAGTTTGCCTTGGAGCTCTTCAGGAGACTGAGTGCAACTAAGCCCAGCgggaatgtgtttttctcccccctgaGTATCTCCTCGGCTCTGGCCATGGTCTATCTCGGAGCTAAAGGGGAAACTGCAAGTCAGATGGCAAAGGCTCTTAATTTCAGCAAAGACAAAAATGTCCATTCCAGTTTTGAGGCACTCAATTCTGAGATCAACAAACCTGCTGCTTCTTACCTGCTGAAACTAGCCAACCGGCTGTATGGGGAAAAGACCTTTAATTTCCTTCAGGAATTCTTGGAATCCACAAGGCAGTTCTACCACGCAGACCTGGTTCCTGTGAGTTTTGCGGGAGCTCCAGAAGAGTCACGGAAGCAGGTCAACATCTGGGTAGAGGAGCAGACAGAAGGTAAAATTCAAGACCTGTTGAAACCAGGAACAGTTGATCCTTCAACAATACTTGTTCTAGTGAATGCAATCTACTTTAAAGGGAATTGGATGCACAAGTttgatgaaaaaaacacaaaagaaatgccctttaaaattaataaaAACGAAAGCAAGCCGGTGATGATGATGTACCAGATGAAAAAGTTCCCCTTTAATTATGTTCCTGAACTGAACCTGCAAGTCCTGGAGCTGCCCTATGTTGGTGAGGAGCTCAGTATGTTTATCCTGCTGCCAGAGGAGATCAGTGATGGCTCCTCTGCACTGGAGAAGCTCGAGAAGGAGATGACTCTGAAAACAATCCATGAATGGACAAAGAGGGAGAACATGGACACTAGAACTGATATAATCGTCCATCTTCCCAAATTCAAACtggaagatgattatgaactgAAATCCCCACTGGCCAGTCTGGGGATGGTGGATGTGTTTGATGGAGTTCGAGCTGACCTGTCGGGAATGAACAGTGGCCCGGGGTTGTTTTTGTCTACTGTTGTCCACAAGTCCTTCGTTGAGGTGAACGAAGAAGGCACAGAGGCTGCAGCTGCCACAGCAGGCATTGTTGCATTCTGCATGATGCGTGAGGAGCATTTCACTGCTGACCACCCATTCCTCTTCTTCATTAGACACAACAAGTCCAAGAGCATTCTCTTTTTTGGGAGGTATTCCTCCCCGTAACTGAGGTGTTAATGTCCAACACAGAGTGCACAGATATGTAATAATAAAGTAAc

Function

GO:

id name namespace
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0005615 extracellular space cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
K23425 SERPINB1; leukocyte elastase inhibitor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019557 True 1303 mRNA 0.45 7 29761329 29766606

Neighbor

gene id symbol gene type direction distance location
AMCG00019546 NA coding downstream 319552 29440921 ~ 29441777 (-)
AMCG00019544 NA coding downstream 356307 29404063 ~ 29405022 (-)
AMCG00019545 NA coding downstream 357331 29403341 ~ 29403998 (-)
AMCG00019543 NA coding downstream 460792 29278797 ~ 29300537 (-)
AMCG00019539 NA coding downstream 500634 29248564 ~ 29260695 (-)
AMCG00019555 wrnip1,LOC103135799,LOC106941779 coding upstream 7079 29773685 ~ 29785242 (-)
AMCG00019564 foxc1,foxc1a,LOC103370816,LOC104941097,LOC106532673 coding upstream 370125 30136731 ~ 30138161 (-)
AMCG00019563 foxf2,LOC102792585 coding upstream 400909 30167515 ~ 30172280 (-)
AMCG00019566 NA coding upstream 416909 30183515 ~ 30184507 (-)
AMCG00019571 irf4a,irf4,LOC108267998,LOC107565529 coding upstream 681587 30448193 ~ 30462200 (-)
G35111 NA non-coding downstream 29562 29718345 ~ 29731767 (-)
G35083 NA non-coding downstream 127593 29632194 ~ 29633736 (-)
G35014 NA non-coding downstream 811099 28949967 ~ 28950230 (-)
G35002 NA non-coding downstream 935661 28825320 ~ 28825668 (-)
G34968 NA non-coding downstream 1114062 28640232 ~ 28647267 (-)
G35129 NA non-coding upstream 4980 29771586 ~ 29772192 (-)
G35144 NA non-coding upstream 60051 29826657 ~ 29828650 (-)
G35145 NA non-coding upstream 81038 29847644 ~ 29847858 (-)
G35157 gmds,LOC107721371,LOC107556133 non-coding upstream 315044 30081650 ~ 30126330 (-)
G35190 NA non-coding upstream 645592 30412198 ~ 30442590 (-)
G35101 NA other downstream 76027 29679229 ~ 29685302 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 115366 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 211167 29535744 ~ 29550162 (-)
G35067 NA other downstream 239345 29517996 ~ 29521984 (-)
AMCG00019500 pign other downstream 5666665 24052011 ~ 24094664 (-)
AMCG00019597 NA other upstream 1655423 31422029 ~ 31427583 (-)
G35476 LOC107575789 other upstream 2455458 32222064 ~ 32233398 (-)
AMCG00019645 NA other upstream 4744127 34510733 ~ 34522270 (-)
G35867 NA other upstream 5288413 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 6168190 35934796 ~ 35981536 (-)

Expression


Co-expression Network